| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1081 |
|---|
| Symbol | |
|---|
| ID | 9155221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1106448 |
|---|
| End bp | 1109201 |
|---|
| Gene Length | 2754 bp |
|---|
| Protein Length | 917 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | preprotein translocase, SecA subunit |
|---|
| Protein accession | YP_003646052 |
|---|
| Protein GI | 296138809 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTCTCT CCAAGGTGCT GCGGTTCGGC GAAGGCCGGA TGGTCAAGCG GCTCGACGGC
CTGGCCTCCT ACGTGGAGAG CCTGAACGAC GAGTACGAGG CGCTCTCCGA CGAGAAACTG
CAGGCCAAGA CGGACATCTT CAAGAAGCGT CTGGAGCAGG GCGAGACCCT CGACGACATC
CTTCCGGAGG CCTTCGCGAC GGCCCGTGAG GCGTCCTGGC GGGTTCTCGG GCAGAAGCCG
TACCACGTGC AGATCATGGG TGCGGGCGCG CTGCACCAGG GCGATATCGC CGAGATGAAG
ACCGGCGAGG GCAAGACCCT GACCTCGGTA ATGGCGGCCT ACGCCAACGC GCTCACCGGT
GACGGGGTGC ACCTGGTCAC CACCAACGAC TACCTCGCCA AGCGCGACGC GGACTGGATG
GGCCGGGTCC ACCGCTTCCT CGGCCTCGAG GTGGACTGCA TCCTGTCCGG GCAGGATCCG
GATCGCCGCC GGCAGGCCTA CGCCGCCGAC ATCACCTACG GCACCAACAA CGAGTTCGGT
TTCGACTACC TGCGCGACAA CATGGCGCAC AGCGTGGACG AACTGGTCCA GCGCGGGCAC
AACTACGCCA TCGTCGACGA GGTCGACTCG ATCCTCATCG ACGAGGCCCG CACCCCGCTG
ATCATCTCGG GTCCCGCCGA CGGCTCGTCG AAGTGGTACA CCGAGTTCGC CCGGATCGTT
CCGCAGATGG AGAAGGACGT CCACTACGAG GTGGACATCC GTAAGAAGAC CATCGGTGTG
AACGAGGCCG GCGTGGAACT GGTCGAGGAC CAGCTGGGCA TCGACAACCT GTACGACTCC
GCCAACTCGC TGCTGGTGAG CTACCTCAAC AACGCGATCA AGGCCAAAGA GCTGTACGAG
CGCGACAAGG ACTACATCGT CCGGTCGGGC GAGGTGCTCA TCGTCGACGA GTTCACCGGC
CGCGTGCTGG CCGGCCGCCG CTTCAACGAG GGCATGCACC AGGCGCTCGA GGCGAAGGAG
GGCGTGGAGA TCCAGGCGGA GAACCAGACC CTGGCCACCA TCACGCTGCA GAACTACTTC
CGCCTCTACG ACAAGCTCTC GGGTATGACC GGTACCGCCG AGACCGAGGC CGCGGAACTG
CACCAGATCT ACAAGTTGGG CGTCATCCCG ATCCCCACCA ATAAGCCGAT GATCCGCAAG
GACCAGACCG ACCTCATCTA CAAGACCGAG GAGGCGAAGT TCGCGGCGAT CGTCGACGAC
ATCGCCGAGC GGCACGAGGC CGGCCAGCCG GTGCTGATCG GTACCACCTC GGTGGAGCGT
TCGGAGTACC TGTCGCGGCA GCTGGAGAAG CGCAAGATCA AGCACACGGT GCTCAATGCG
AAGTTCCACG AGCAGGAGGC GGCGATCATC GCCAAGGCGG GCACGCCCGG CGCGGTCACC
GTGGCCACCA ACATGGCCGG CCGCGGCACC GACGTGGTGC TCGGCGGCAA CCCGGACATC
CTCGCCGACC TGGCGCTGCG CGAACGCGGC CTCGATCCGG TGACCACGCC CGAGGAGTAC
GAGGCGGCGT GGGACGAGAC CATCGAGCAG GTGAAGCAGG ACTCCAAGGA GGCGGGCGAC
AAGGTCCGCG AGGCCGGCGG GCTCTACGTG CTCGGCACCG AGCGGCACGA GTCGCGTCGC
ATCGACAACC AGCTCCGCGG TCGCTCCGGC CGCCAGGGCG ACCCGGGTGA GTCCCGGTTC
TACCTCTCTC TCGGCGATGA GCTGATGCGG CGCTTCAACG GCGCGCAGAT CGAGGCGTGG
ATGAACCGCG TCAACCTGCC CGACGACGTG CCGATCGACA ACAAGTTCGT CTCCCGCGCG
ATTCGCAGCG CGCAGACACA GGTCGAGCAG CAGAACTTCG AGATCCGCAA GAACGTCCTC
AAGTACGACG ACGTGCAGAA CGAGCAGCGC AAGGTGATCT ACGACGAGCG CCGCAAGATC
CTGTCGGGCG AGGACCTCTT CGATCAGGTC AATCACATGA CCGACGACGT GGTCTCGGCG
TATGTGGACG GCGCGACCGC CACCGGGTAC GTGGAGGACT GGGACCTCGA CGAGCTGTGG
GAAGCGCTGC GCACGCTGTA CCCGATCGAG CTGGACTGGA AGAAGGTCGT CGGCGAGGAC
GAGAACGGCG ATCGCGACGA GATCACCCGC GACGAGCTGC GTACGGTGCT CCTCGACGAC
ATCCACGACG CCTACGACAA GCATCAGGAG CGGATCGAGA CCGCGGCGGG CGAGGGCACG
ATGCGTCAGG TCGAACGTTC GGTGCTGCTG TCCGTGCTCG ATCAGAAGTG GCGCGAACAC
CTCTACGAGA TGGACTACCT CAAGGAGGGC ATCGGCCTGC GCCAGATCGC CCAGCGCGAT
CCCGTGGTCG AGTACCAGCG CGAGGGCTTC GACATGTTCA ACGGCATGCT GGAGGGACTC
AAGGAGGAGT CGGTCGCCAC CCTGTTCAAG GTGCAGGTCC AGGAACCCGA CGCGACCGGC
GAGGCGGGCA CGCCCGGCGG CGGCACCGCG CAGGTCAATG CCCCGGTGGC CGAGACCGAT
CCGGAGAAGA TCACCCTGAC GGGTCCGTCC GAGCAGGGGG AGGCGACGGA TCTGTCGCAG
GCCGCCGACG AGCCGGTGGG CACCCGCGCG GAGCGCCGCG CCGCGCAGCG CGAGGCGAAC
AAGTCGGCGA AGTCGGCACC CGCGGGGCGC CGCCCGAAGC ACCGCCGCAA GTAG
|
|---|
| Protein sequence | MVLSKVLRFG EGRMVKRLDG LASYVESLND EYEALSDEKL QAKTDIFKKR LEQGETLDDI
LPEAFATARE ASWRVLGQKP YHVQIMGAGA LHQGDIAEMK TGEGKTLTSV MAAYANALTG
DGVHLVTTND YLAKRDADWM GRVHRFLGLE VDCILSGQDP DRRRQAYAAD ITYGTNNEFG
FDYLRDNMAH SVDELVQRGH NYAIVDEVDS ILIDEARTPL IISGPADGSS KWYTEFARIV
PQMEKDVHYE VDIRKKTIGV NEAGVELVED QLGIDNLYDS ANSLLVSYLN NAIKAKELYE
RDKDYIVRSG EVLIVDEFTG RVLAGRRFNE GMHQALEAKE GVEIQAENQT LATITLQNYF
RLYDKLSGMT GTAETEAAEL HQIYKLGVIP IPTNKPMIRK DQTDLIYKTE EAKFAAIVDD
IAERHEAGQP VLIGTTSVER SEYLSRQLEK RKIKHTVLNA KFHEQEAAII AKAGTPGAVT
VATNMAGRGT DVVLGGNPDI LADLALRERG LDPVTTPEEY EAAWDETIEQ VKQDSKEAGD
KVREAGGLYV LGTERHESRR IDNQLRGRSG RQGDPGESRF YLSLGDELMR RFNGAQIEAW
MNRVNLPDDV PIDNKFVSRA IRSAQTQVEQ QNFEIRKNVL KYDDVQNEQR KVIYDERRKI
LSGEDLFDQV NHMTDDVVSA YVDGATATGY VEDWDLDELW EALRTLYPIE LDWKKVVGED
ENGDRDEITR DELRTVLLDD IHDAYDKHQE RIETAAGEGT MRQVERSVLL SVLDQKWREH
LYEMDYLKEG IGLRQIAQRD PVVEYQREGF DMFNGMLEGL KEESVATLFK VQVQEPDATG
EAGTPGGGTA QVNAPVAETD PEKITLTGPS EQGEATDLSQ AADEPVGTRA ERRAAQREAN
KSAKSAPAGR RPKHRRK
|
|---|
| |