Gene Tpau_1076 details

Gene Information

• Locus tag: Tpau_1076
• ID: 9155216
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1100540
• End bp: 1101226
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 68%
• Product: two component transcriptional regulator, winged helix family
• Protein accession: YP_003646047
• Protein GI: 296138804

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAGCA TGAAACCCCG CATCCTGGTG ATCGACGACG ATCCGGCGCT GGCGGAGATG 
CTGACCATCG TGCTGCGCAA CGAGGGCTTC GACTCCATGG TGGTCGGTGA CGGCACGCAG 
GCGCTCGGCG CCGCCCGCGA GTTCCGGCCC GACCTGGTGC TGCTCGACCT CATGCTGCCC 
GGTATGAACG GCATCGACGT GGCCCGCGTG CTGCGCGCCG ACTCCAACGT GCCGATCGTG 
ATGCTGACCG CGAAGGCCGA CACCGTCGAC GTGGTGCTCG GACTCGAATC CGGTGCCGAC 
GACTACGTGA TCAAGCCGTT CAAGCCGAAG GAGCTGGTGG CGCGGGTGCG TGCCCGGCTG 
CGTCGCACCG CCGACGAGCC CAGCGAGTTG CTCTCCATCG GCAACGTGAT CATCGACGTC 
CCCGCGCACA AGGTCACCCG TGACGGCGAG GTCGTGCCGC TCACCCCCAC CGAGTTCGAC 
CTGCTGGTCA CGATGGCCCG CAAGCCGCGC CAGGTGTTCA CCCGCGACGT GCTGCTCGAA 
CAGGTGTGGG GTTACCGGCA CCCGGCCGAC ACCCGGCTGG TCAACGTCCA CATCCAGCGT 
CTGCGCGCGA AGATCGAGAA GGATCCGGAG AACCCGGAGA TCGTGCTCAC GCTGAGGGGA 
GTCGGCTACA AGGCCGGTCC GGCGTGA 

 

Protein sequence

MDSMKPRILV IDDDPALAEM LTIVLRNEGF DSMVVGDGTQ ALGAAREFRP DLVLLDLMLP 
GMNGIDVARV LRADSNVPIV MLTAKADTVD VVLGLESGAD DYVIKPFKPK ELVARVRARL 
RRTADEPSEL LSIGNVIIDV PAHKVTRDGE VVPLTPTEFD LLVTMARKPR QVFTRDVLLE 
QVWGYRHPAD TRLVNVHIQR LRAKIEKDPE NPEIVLTLRG VGYKAGPA