Gene Tpau_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1041 
Symbol 
ID9155181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1068428 
End bp1069072 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content72% 
IMG OID 
Productmaf protein 
Protein accessionYP_003646013 
Protein GI296138770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.407711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGCGT CGGCCTCGCC GGCGCGTCTG GGCGTGCTCC GCGCGGCCGG GGTCGAACCG 
GCCGTGATCG TCTCGCAGGT CGACGAGGAT GCGATCCTCG CCGAACTGGG ATCCGATGCG 
GCGCATGAGG ATGCGGTGAC CGCGCTGGCT CGCGCCAAGG CCCACGATGT GGCCGCCCGG 
GTCACGGACG ATCCGTCTGC GCGGGCCCGT CGCACCGTGA TCGTGGGCTG CGACTCGATG 
CTCTCGATCG GCGGAGCCCT AGTCGGCAAG CCGCACACCC CGGCGGTCGC CCGCGAGCGA 
TGGGGCGCGA TGCGCGGCCG CGCGGGTCGC CTGCTGACGG GCCACTGTGT CCTGCTCCTC 
GACGGCGACG GTGCGCCGCC CCGCGAGGCC ACCGGCACGG GCGGTACCAC GCTGCGATTC 
GGCGCACCGT CGGACGCCGA GATCGACGCC TACGTGGCCA CCGGTGAACC GCTCGAAGTG 
GCGGGCGCGT TCACCCTGGA CGGTCTCGGC GGCTGGTTCA TCGAGGGGAT CGACGGCGAC 
CCGAGTTCGG TGATCGGCAT TTCATTGCCA TTGATGCGCC GGCTGTTGAG CGAACTCGGG 
GTCGGCGTGG TCGACCTGTG GCGGGGAGTG CCGGATCCGG CGTGA
 
Protein sequence
MLASASPARL GVLRAAGVEP AVIVSQVDED AILAELGSDA AHEDAVTALA RAKAHDVAAR 
VTDDPSARAR RTVIVGCDSM LSIGGALVGK PHTPAVARER WGAMRGRAGR LLTGHCVLLL 
DGDGAPPREA TGTGGTTLRF GAPSDAEIDA YVATGEPLEV AGAFTLDGLG GWFIEGIDGD 
PSSVIGISLP LMRRLLSELG VGVVDLWRGV PDPA