Gene Tpau_0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0844 
Symbol 
ID9154984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp854711 
End bp855922 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003645818 
Protein GI296138575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGTG TTTTCGTGTC CCTGCGGACG CGGAACTATC GGCTCTGGGC CGGCGGACAG 
TCGGTCAGCC TCGTCGGCAC CTGGATGCAA CGCGTCGCCG AGGACTGGCT GGTGCTCGAT
CTCGCGCACG GCCGCGCCTG GGTGCTCGGT GTGGTGATGG CCCTGCAGTT CGGCCCCACC
CTGCTGCTAT CGGCGTGGGC GGGATTGCTC GCGGACCGCT ACGACAAGCG GCGGGTCCTG
ATGCTCACAC AGTCGGCGGC CGCACTCTGC GCCGCGGCCC TCGCGGTGCT CACGCTCTCC
GGCATCGTCG CGCTGTGGCA CGTCTTCGTG ATCGCCTTCG TCTTCGGATG TACCGCGGCG
ATCGCGGGTC CCTTCCGGCA GGCGTTCACC ATCGAGATGG TGGGGCCGGA GTTGTTGCCC
AATGCCATCG GGCTCAATTC GATGGTGTTC AACGCCGCCC GAATCGTGGG GCCGGCGATC
GCGGGCCTGC TCATCGCCGG CGTGGGCACC GGCGCGGTGT TCGCGGTCAA CGCCGTGTTC
ACCGGCGCGA TCGTGGCTGC GCTGCTCGCG ATGCGAGTGG CACAGCTGCA CCCGTCGCCA
CCGGTGGAGC GCGCGAAGGG CCAGGTGCGC GAGGGCTTCC GGTATGTCCG ACACAGGCCC
GAACTGCTGC TGGTGATCGT CGCGGTGTTC TTCGTCTCGA CCTTCGGCAT CAACTTCCCA
CTGGCCCTGT CGATCCTGGC CAGGCAGGGC TTCGGTCTCG GCGCCGATGC CTACGGCCTC
CTGTCCACCA TGCTCGCGAT CGGCACGCTC TCCGGAGCAC TCGTCGCCGC GAAACGCACC
GGACGAGCAG CGTTGCGCAC GTGCCTGGTG GGCGGAACGG CGTTCGGTGT GGTCCAGGTG
TGCACCGGCC TGGCTCCGTG GTTCTGGCTG GCCGCCGCGC TACTGATCGC GGTGGGATTC
CTGCAGATGG CCTTCACCAC CTCGGCGATG AGCATCATGC AACTCTCCGT GGATCCCGAG
TTCCGCGGCC GGGTCATGGG CATCTACATG CTGGCCTTCC TCGGCGGCAC ACCGCTGGGT
GCGCCGCTCC TCGGCGCCAT CGCCGACGCG ACGACGCCGA CCGCGCCCCT CCTCGTCGGC
GGGGTGGTCT CCGCTCTCAC CTGCGCCCTG TGCGGGATGT ATGCGCTGCG TGGGTCGCGG
AACAGCGTCT GA
 
Protein sequence
MPSVFVSLRT RNYRLWAGGQ SVSLVGTWMQ RVAEDWLVLD LAHGRAWVLG VVMALQFGPT 
LLLSAWAGLL ADRYDKRRVL MLTQSAAALC AAALAVLTLS GIVALWHVFV IAFVFGCTAA
IAGPFRQAFT IEMVGPELLP NAIGLNSMVF NAARIVGPAI AGLLIAGVGT GAVFAVNAVF
TGAIVAALLA MRVAQLHPSP PVERAKGQVR EGFRYVRHRP ELLLVIVAVF FVSTFGINFP
LALSILARQG FGLGADAYGL LSTMLAIGTL SGALVAAKRT GRAALRTCLV GGTAFGVVQV
CTGLAPWFWL AAALLIAVGF LQMAFTTSAM SIMQLSVDPE FRGRVMGIYM LAFLGGTPLG
APLLGAIADA TTPTAPLLVG GVVSALTCAL CGMYALRGSR NSV