Gene Tpau_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0798 
Symbol 
ID9154938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp812176 
End bp813459 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003645773 
Protein GI296138530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.649832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGTGG TGAATTGGCA CCTGATCGAG CAGTTGGTCA CCATTCCACT GTTCACCGGC 
ATCATCGGTT ACATCACCAA CTGGACCGGC ATTCTCATGC TGTTCGAACC GAAACGTTTT
TACGGCGTCA AGGTTCCCGG TGTGGCCACC CTGTATCCGT TCCTGCCCCG CCGGGTCCAG
GTGATCCCGG CGATCCGTCC CGACGGTCGC ATCGGTTGGC AGGGGATCGT TCCCTCGCGC
GCCGAGAAGA TGGCCAGCAT CGCGGTGGAC AAGTCGTTGT CCAAGGTAGG AAGCATTGCG
CAGTTCTATG AGGTGATGGA TCCGGAGTAC ATCTCCGAGC AGTTGACCCG CGCCGCGTTG
CCCGAGATCC CGTCCGTGGT CGAGGGCATC ATGCGGCGGG AGAATCCTCG GCTGTGGTAC
TCGCTGCCCG AAGACATCAA ACTCCTGGTG TACCGGCGGG TGGCCGCCTC CTTGCCCACG
GACGTCCGGA AGATCACGTC GACCATCGGC GAGAACATCG ACGATTACAT CGACGCGAAA
TTGATGGTGA TCCGCTACCT CTCGGCGAAT CCGAAGGTGC TCAAGGACAT CTTCTACAAC
GTCGGCCGGA AAGAACTGTT GTTCATGCAG AACTTCGGAT TCTATTTCGG ATATCCCATG
GGATTCGTGC TGGTTGGTCT CCTCCATTTC TTCCCGTACT GGTGGCTGCT TCCGCTGGGC
GGGATCGTGA TCGGGTACGT GGTGAACTAC GTCGGCCTCA CGATGATCTT CGAGCCGTTG
CACTCCAGCA AGTGGGTGCC GTGGCGGCAG GGGCTGTTTC TCAAACGTCG TCAGGAGATC
GCCGAGCAGT ACGCCACCGT GATGGCCGAC CAGGTGGTGA CGGTCGAGAA CATCTGCGAC
GAGCTGCTGC ACGGTCCGCG CTCGGACCGC ACGCGTGCCA CCGTCGAATC GGTGCTCCGT
GAATCGGTCG ACAAGGCCTC GGGCTGGGCC CGCGGCGTGG TGAAGCTGTC GGTGGGCTAC
GACACCTACG AGCGGGTGCC CCAACTGGCC GGTGCCGAGG CGATCAAGGT AGCCGAGCAG
ACGGTCAGTG ACCCCGAGTT CGCCGCCCAG CAGCAGACCA AGGTGCGCGA CTTCGTGGTC
GCCCGGATGA GTATCCTGCG CCCGGAGGAC CTGAGCGAGC TGCTGCGGTC CGCCATCAAA
CAGGACGAGT GGTTGCTGTT CCTGCACGGC GCGGTGCTGG GCTCCGCGGC AGGCTTCCTC
CACCTAGCGA TCTTCGGAGT GTGA
 
Protein sequence
MSVVNWHLIE QLVTIPLFTG IIGYITNWTG ILMLFEPKRF YGVKVPGVAT LYPFLPRRVQ 
VIPAIRPDGR IGWQGIVPSR AEKMASIAVD KSLSKVGSIA QFYEVMDPEY ISEQLTRAAL
PEIPSVVEGI MRRENPRLWY SLPEDIKLLV YRRVAASLPT DVRKITSTIG ENIDDYIDAK
LMVIRYLSAN PKVLKDIFYN VGRKELLFMQ NFGFYFGYPM GFVLVGLLHF FPYWWLLPLG
GIVIGYVVNY VGLTMIFEPL HSSKWVPWRQ GLFLKRRQEI AEQYATVMAD QVVTVENICD
ELLHGPRSDR TRATVESVLR ESVDKASGWA RGVVKLSVGY DTYERVPQLA GAEAIKVAEQ
TVSDPEFAAQ QQTKVRDFVV ARMSILRPED LSELLRSAIK QDEWLLFLHG AVLGSAAGFL
HLAIFGV