| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0679 |
|---|
| Symbol | |
|---|
| ID | 9154815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 695512 |
|---|
| End bp | 697065 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003645655 |
|---|
| Protein GI | 296138412 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGGCG CGGCGAGCGC GTCCGGCGAT CAGTCGAACC AGGAAGGCCT CGAGGACAAG
GGCCTTGCCC CCGGCAAGGT CGGCCTCCTC GATGGTGTCG TCCTCGGGAT ATCCACCGTG
GCACCCGGTT ACACGCTCAC GGCGAGCATC GGGCTGATCG TCGCCGCAGT GGGTTTGAAG
ATGCCCGCGA TCTTCATCGC GGGTTTCATT CCGATGTTCC TCACCGCATA CGCCTACCGC
GAGCTCAACT CCCGGCTGCC CGACTGCGGT GCTTCATTCA CCTGGTCCAC CAAGGCCTTC
GGCCCGTACG TCGGTTGGAT GTGCGGGTGG GGCATGGTGC TCGCCACGAT CATCGTGCTC
TCCAACCTCG CGGCAATCGC CGTCGAGTAC TTCTACCTGT TCATCGCCCA ACTGACGGGC
AACGAATCCA TCGCCGAGTT ATCGCAGAAC ACGGCCGTCA ACATCGCGAC CACGCTTGCC
TTCATCGCCG TCGCGACGTG GATCGCCGGC CGCGGCATCA CCACCAGCGA GAAGCTGCAA
TACGTGCTCG TCGGGTTCCA GCTCGTCGTG CTCGTGGCGT TCGCCGCGTT CGCGATCGCC
AAATCCACCT CGGCGCCCAC CGGCCTGGCG TTCTCGATCG ACTGGTTCAA CCCGTTCACG
GGAGTCACCA TCGCCGCCTT CGTCGTCGGC GTCACCGGCT CGATCTTCGC GTTCTGGGGG
TGGGATACCT GCCTCACTCT CGGCGAGGAA TCGAAGGATC CGCACAAGGT ACCCGGCCGG
GCCGGCCTGC TGGCCGTGAT CACCATCCTG CTGACCTACC TGCTGGTCGC GGTGGCGGTG
ATGATGTACG CGGGGGTGGG ATCCGAGGGC CTCGGCCTGG GCAACCCCGA CAACGCGGAG
AACGTCTTCC GGCCACTGGC CGATCCGGTG ATGGGCACCT CCGGTGGCCT GCTGTTGTTC
CTCGCCATCT TCGCGTCGTC GGCGGCGAGC CTGCAGACCA CGTTCCTCCC AGCAGCGCGC
ACCATGCTCG CGATGGGGGC GTACGGCGCG TTCCCCCGTA AGCTCGCGTC GATCCATCCC
AGGTATCTGG TTCCGACCTA CGCCACCGTG GTCGCGGGGA TCACCACCAG CGTCTTCTAC
ACCGCGGTCA AGCTTCTCTC CGAACGGGCC CTGGTCGATA CCATTGCGGC GCTGGGAATC
ATGATCTGCT GGTACTACAG CATCACCGCC TTCGCGTGCG TCTGGTACTT CCGGCGGGAA
CTGTTCGCCA GCGCCCACAA CGTGATCTAC AAGCTGGTGT TCCCCTTGAT CGGCGGACTC
ATGCTCGCCG CTGTCTTCCT CGTCTCGCTG CAGGAGAGCC TCGATCCCGG CAACGGCAGC
GGTGCCGAGC TGTTCGGCAT CGGCTTGGTG TTCTACATCG GCTTCGGCCT GCTTCTGCTC
GGCACGATGC TGATGCTGGT GCGACGGGCC CGCCATCCCG CGTTCTTCCG GGGCAAGACC
CTCAGTTGGG ATGCACCGAG CGGCGCCTCA TCGCCCGATA CCGGCCGAGG GTGA
|
|---|
| Protein sequence | MPGAASASGD QSNQEGLEDK GLAPGKVGLL DGVVLGISTV APGYTLTASI GLIVAAVGLK
MPAIFIAGFI PMFLTAYAYR ELNSRLPDCG ASFTWSTKAF GPYVGWMCGW GMVLATIIVL
SNLAAIAVEY FYLFIAQLTG NESIAELSQN TAVNIATTLA FIAVATWIAG RGITTSEKLQ
YVLVGFQLVV LVAFAAFAIA KSTSAPTGLA FSIDWFNPFT GVTIAAFVVG VTGSIFAFWG
WDTCLTLGEE SKDPHKVPGR AGLLAVITIL LTYLLVAVAV MMYAGVGSEG LGLGNPDNAE
NVFRPLADPV MGTSGGLLLF LAIFASSAAS LQTTFLPAAR TMLAMGAYGA FPRKLASIHP
RYLVPTYATV VAGITTSVFY TAVKLLSERA LVDTIAALGI MICWYYSITA FACVWYFRRE
LFASAHNVIY KLVFPLIGGL MLAAVFLVSL QESLDPGNGS GAELFGIGLV FYIGFGLLLL
GTMLMLVRRA RHPAFFRGKT LSWDAPSGAS SPDTGRG
|
|---|
| |