Gene Tpau_0677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0677 
Symbol 
ID9154813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp692762 
End bp693478 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003645653 
Protein GI296138410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGG AGAAGCGGCA GCGCTCCAAG CGCGGCGACG GCGAGCGCCT GGGCGCCGAC 
ATACTCGACG CGGCAACACA ACTCCTGATC GAGACCGGAA GTGCCGAAGC CGTGTCGATC 
CGTGGTGTCG CGAACCGGGT CGGCGTCACG CCACCGTCGA TCTACCTGCA CTACTCCGAT 
AAGGAGGCGC TGCTCACCGC CGTGGTGGCT CGTTACCTCG GCCAGCTCGA CGAGGAGATG 
ACCGCCGCCG AAGCCGATGC CACCACTCCG CTGGACGCCG CGCGCGCCCA AGGCCTCGCC 
TTCGTCCGGT TCGCTCTCGC GACCCCCGAG TTGTACCGGC TGGCCGCGAT GACCCCGTCG 
GAGTCGGCCT CCGACGTGGA CACTGTGCTC AACGCCGCCG CGTTCAGTCA CCTCGAGGAC 
ACCGTGCGGA GATTGCAGGA CGAGGGCTAT TACCCGCCGG GCGATCCACG GCCCATCGCG 
CTGCAGATGC TGACGATCGT GCACGGAGTC GCCTCGCTGC TGGTAGCCAA GCCCTTCCTG 
CCCTGGGGGG ATCCGATCGA GTACGCGGAC CGGGTGATCG GCGGCGCCTG CCTCGGCATC 
GCCCTCACCA CCGGCATGGA CGAGCTTCCC ACCGGCGCAC AGGCCTTGGA GACGGTGCGC 
GCGTTGCGCG GCCACATCGA CGACTCGGGC CGATCGGGTG CTGCGCACAG CACCTGA
 
Protein sequence
MTAEKRQRSK RGDGERLGAD ILDAATQLLI ETGSAEAVSI RGVANRVGVT PPSIYLHYSD 
KEALLTAVVA RYLGQLDEEM TAAEADATTP LDAARAQGLA FVRFALATPE LYRLAAMTPS 
ESASDVDTVL NAAAFSHLED TVRRLQDEGY YPPGDPRPIA LQMLTIVHGV ASLLVAKPFL 
PWGDPIEYAD RVIGGACLGI ALTTGMDELP TGAQALETVR ALRGHIDDSG RSGAAHST