Gene Tpau_0640 details

Gene Information

• Locus tag: Tpau_0640
• ID: 9154776
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 658588
• End bp: 659346
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 69%
• Product: Trans-aconitate 2-methyltransferase
• Protein accession: YP_003645616
• Protein GI: 296138373

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGATC ATCGTTGGGA CCCATCGCAG TACCTTCGGT TCGGCGACGA GCGGACCCGT 
CCCTTCCTCG ACCTGATCGC CCGTATCCCG GGGACGGCGC GCACCATCGT CGACCTGGGC 
TGCGGTGCCG GCAACGACGT GCCGCCCCTG CGGGCACGGT GGCCGCAGGC GCGGATTCAC 
GGCGTGGATT CCAGCGTCGA GATGATCGAC CGGGCGCGCG CCGATATCGA CGATCCGGAG 
GCCACTTTCG AGGTCGCCGA TGCCGCCGCC TGGCGCCCGG CCGGTGAGCG GCCCGATGTG 
ATCGTCTCCA ACGCGATGTT CCAGTGGGTC GACGGGCACA TCGACGCGCT GGCCGCCATC 
GCCGACCGTG CCGCACGCGC CTTCGCGTTC CAGGTGCCGG GCAACCAGAA CGCACCGTCG 
CACGCGCTGC TCGCACAGGT CGCAGCGGAG TTCGGCGTCA CCGGTTACCG CCACGTGGAT 
GTCCGTGATC CGGCGGAATA CCTCGCGGTG TTGCAGCGTC CCGGCTGGAC CGTGGACGCC 
TGGGAGACCA CCTATCTGCA CGTGCTGCAG GGACCGGACG CGGTCTTCGA GTGGATCTCG 
GGAACCGGCG CCCGCCCCGT GCTGGCGCGA CTCGACGGCG CCACGAAGGA TGATTTCGTG 
CGGCGCTACA AGGCCGCCCT CGCCGCGGCG TATCCACCGC AGGAGTTCGG CACGGTACTG 
CCGTTCCGGC GGATTTTCGC TGTCGCCGTC AGGATGTGA 

 

Protein sequence

MTDHRWDPSQ YLRFGDERTR PFLDLIARIP GTARTIVDLG CGAGNDVPPL RARWPQARIH 
GVDSSVEMID RARADIDDPE ATFEVADAAA WRPAGERPDV IVSNAMFQWV DGHIDALAAI 
ADRAARAFAF QVPGNQNAPS HALLAQVAAE FGVTGYRHVD VRDPAEYLAV LQRPGWTVDA 
WETTYLHVLQ GPDAVFEWIS GTGARPVLAR LDGATKDDFV RRYKAALAAA YPPQEFGTVL 
PFRRIFAVAV RM