| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0611 |
|---|
| Symbol | |
|---|
| ID | 9154747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 632861 |
|---|
| End bp | 633757 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | periplasmic solute binding protein |
|---|
| Protein accession | YP_003645588 |
|---|
| Protein GI | 296138345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTATCC GCAATCGCCT GGCCCAGGCC GTCGCAGTCA CCGCCGTCGC GACCCTGACC
CTCACGGCGT GCGGGCAGGC ATCGTCGGAG CCGGCCGACG GTAAGCCCTC CGTCGTCGCC
TCGACCGACG TGTACGGCGC CGTCGCCAAG GCCGTCGCCG GCGATCACGC CACCGTCACG
TCGCTGTTCT CCAATCCCAC CGGCGATCCG CATGAATTCG AGCCCTCCGC ACAGGACACC
CTGGCGGTCA AGCGAGCCGC GGTGATCGTC TACAACGGCG GCCACTACGA CGCGTACATC
GAGAAGGCCG CCGAGGGCGC CACGGGAGCC AAGGTCGACG CGGTCTCGCA GCAGGAACCC
CGGGGCGAGA ACGAACACGT CTTCTACGAC CTGCCCACCA TCCAGAAGGT GGCGACTGCG
ATCGCGAAGG CCCTCTCCGC GAAGGACTCC GCGAACACCA CCGATTACGA GGCGAAGGCC
GCGGCGTTCA ACAGCCGACT CGACGTCGTG ATCGACCGGG CCCGCGAGAT CGGTCGGGCC
AACCCCGGCG CGAAGGTCGC CGCCACCGAA CCCGTGGCCG GCTACCTGCT CACTCTGGCC
GGTCTCACCG ATGCCACACC GCCCCGCTAC ACCGCCGCCA TCGAGTCGGG CACCGATCCG
GCGCCGGCCG ATATCGCGGC CGCCACCGCC CTGGTCACCG GCAAGCAGGT ACGCGCCGTG
ATCCTCAACG CCCAGACCGA GAGCCCGGTC ACCACCGCGT TCGCGACCAG CGCGCAGAGC
GCGGGCGTGC CCGTCGTGCG GATCACCGAG TCCCTCCCCG AGGGCGTCGA CGATTACGTC
GCCTGGCAGG ACAAGAACGT GACCCAGCTC GCCGATGCCC TGAAACCGCG CCCGTGA
|
|---|
| Protein sequence | MRIRNRLAQA VAVTAVATLT LTACGQASSE PADGKPSVVA STDVYGAVAK AVAGDHATVT
SLFSNPTGDP HEFEPSAQDT LAVKRAAVIV YNGGHYDAYI EKAAEGATGA KVDAVSQQEP
RGENEHVFYD LPTIQKVATA IAKALSAKDS ANTTDYEAKA AAFNSRLDVV IDRAREIGRA
NPGAKVAATE PVAGYLLTLA GLTDATPPRY TAAIESGTDP APADIAAATA LVTGKQVRAV
ILNAQTESPV TTAFATSAQS AGVPVVRITE SLPEGVDDYV AWQDKNVTQL ADALKPRP
|
|---|
| |