| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0538 |
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| Symbol | |
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| ID | 9154674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 566950 |
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| End bp | 568164 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | HNH nuclease |
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| Protein accession | YP_003645518 |
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| Protein GI | 296138275 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.357071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTAG AAGACGTCAG TTCCAGCGCG GCGGGTGGCG AGGTGATCGC AGGACTCGGT
GAACTGGAGC GGTTGCGGGC GCGGGTGGTG TTCAATCAGT ACCGGTTGAT CGTCGAGCTG
TTGCGCACTC GGGTGTGTGA GCGGATCGCC GCCGGGGTGG CACAGGAGCG GTGGGAGGCC
GGTGTCGCGT CCGAGGTGGC GCTCGCGCTG CGGGTCTCGC CGCACCGGGC GACGGCGATG
CTGTCGCGGG CGAAGACCCT CGAACGCGAC CTGCCGGCCA CCTTGTCCCG ATTGCGTGAT
GGAGATATCT CTCCGGAGGC GGTGGAGGTG ATCGTCGCCG GTGTTTCGCA TCTGGAACCA
CGCTTGAAAG GCGAGGCCGA TACCGTGCTG TGCGGGGAAG GTTTCGCGGC GTCGGGGCTC
GGGCTGAAAC GGTTGCAGGA TCGGGTGAAG GAAGTCTCCT ATCAACTCGA CGCGCAGGCC
ACGGTCGACC GTGCGGCGCT GGCGGCGAAA GATCGTCGGG TCACGATCCG TCCGGCACCG
GACTGCATGG CGCGGGTATC GATCCTGCTG CCGGTCGCCC AAGCCGTGGG CCTGTACGCA
GCGGTGAAGA CGGCCGCCGA CAGCGTCTTC GGCACACCCG GCGAATCACG CAGTCGCGGG
CAGATCATGG CCGACACCGC GTTCGCGCGG ATCACCGGCC GCGACGCCGC GGACGGTGTG
CCGGTCACGG TGAATCTGAC CATGCCCGCC ACCGTTCTCC TGGGTGAGGA GTCGGGGATC
GCGCACCTGA CCGGCGGCGG CACACTGCCG GCAGAGATCG CCCGGCACCT CGTCGGCAGA
GCGTCGGAGA AGGCGATCGG ATGGGTCAAA CGCCTCTACG TGCAACCGGA CTCGGGTGCG
GTCGTCGGGC TCGATTCCCG CTCCCGGCTG TTCCCAGCCG GGCTGGCGGA GCTGATCGCA
GCGCGGGATC GGTACTGCCG CACCCCGTAC TGCGACGCCC CGATCGCGCA CACCGACCAC
ATCACCGCAC ACGCCCACGG TGGCGCCACC AGCCTGCACA ACGGGCAGGG ACTGTGCGCC
GCGTGCAACT ACGCCAAAGA AGCCGCGGGT TGGTCCAGCC GCACCGTCGA CGATCCGAGC
GGGCGGCACA CCGTCGAAAC CCGCACCCCG ACAGGACATC TCCACCGATC CACCGCACCG
CCGCATGCGG CGTGA
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| Protein sequence | MEVEDVSSSA AGGEVIAGLG ELERLRARVV FNQYRLIVEL LRTRVCERIA AGVAQERWEA
GVASEVALAL RVSPHRATAM LSRAKTLERD LPATLSRLRD GDISPEAVEV IVAGVSHLEP
RLKGEADTVL CGEGFAASGL GLKRLQDRVK EVSYQLDAQA TVDRAALAAK DRRVTIRPAP
DCMARVSILL PVAQAVGLYA AVKTAADSVF GTPGESRSRG QIMADTAFAR ITGRDAADGV
PVTVNLTMPA TVLLGEESGI AHLTGGGTLP AEIARHLVGR ASEKAIGWVK RLYVQPDSGA
VVGLDSRSRL FPAGLAELIA ARDRYCRTPY CDAPIAHTDH ITAHAHGGAT SLHNGQGLCA
ACNYAKEAAG WSSRTVDDPS GRHTVETRTP TGHLHRSTAP PHAA
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