Gene Tpau_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0509 
Symbol 
ID9154645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp537632 
End bp538351 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content67% 
IMG OID 
ProductSNARE associated Golgi protein-related protein 
Protein accessionYP_003645489 
Protein GI296138246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATTTCA CTGACCTGAC GCTGGCCACC TCGACCACCC TTCAGGCCTT CTCGATCTCG 
GACATCACCG ACCCCGTCGC CGTCCTCAAC GCCTTCGGCC CGATCGCCCT GGTGGGCCTG 
CTGCTGGTCG TGTTCATCGA GTCCGGCGTG CTGTTCCCCG TGCTCCCCGG CGATTCGCTG 
CTGTTCGTCG CCGGCCTGCT CACCGCCGCC GGCACCGGCG CGGCGGTCGG TGAGGCCACG 
TACACCGGCT CGGCGATGTC GCTCCCCGTG CTGCTGATCG GCGTGCCCAT CGCCGCGATC 
CTCGGCTCGC AGGTGGGCTA CTTCATCGGC CGTTTCGGCG GCGAGAAACT GTTCAAGCCC 
GACGCGCGCT TCCTCAAGAC CAAGTACCTC GACGAATCGC ACGAGTTCTT CGAGAAGTAC 
GGCCCGGCCA CACTGGTGCT GGCCCGCTTC GTGCCCTTCG TCCGCACCTT CGCGCCGGTC 
GCCGCGGGCG CCGCGCACAT GAACTACGTG AAGTTCGTCA TCTGGAACGC CATCGGCGCC 
ATCATCTGGG GCGACGGCAT CCTGCTGCTC GGCGTCTGGC TGGGCCAGAT CGACTGGGTG 
CGCGACAACA TCGACAAGAT CTTCATCGGT ATCGTCCTGG TCTCCGTGCT GCCCATCGTG 
TGGGGCGTCG CGAAGAAGTA CCTGTCGGAC CGCCGCGCGA ACTCCTCCGC CAGCGCGTAG
 
Protein sequence
MYFTDLTLAT STTLQAFSIS DITDPVAVLN AFGPIALVGL LLVVFIESGV LFPVLPGDSL 
LFVAGLLTAA GTGAAVGEAT YTGSAMSLPV LLIGVPIAAI LGSQVGYFIG RFGGEKLFKP 
DARFLKTKYL DESHEFFEKY GPATLVLARF VPFVRTFAPV AAGAAHMNYV KFVIWNAIGA 
IIWGDGILLL GVWLGQIDWV RDNIDKIFIG IVLVSVLPIV WGVAKKYLSD RRANSSASA