| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0483 |
|---|
| Symbol | |
|---|
| ID | 9154619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 507990 |
|---|
| End bp | 510482 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_003645463 |
|---|
| Protein GI | 296138220 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATA CCACCGTCGC GGTGCCCGCG CGTGGCCTCA TCCTGCTGGT CGGCGCCTCC
GGCAGCGGCA AGTCCACGTT CGCGCGCGAG CACTTCCGCG CGACCGAGGT GGTCTCCAGT
GATGTCTGCC GAGGCCTCGT GGCCGACGAT GAGAACGACC AGTCGGCAAC CCCGGACGCC
TTCGACCTGC TGCACCACCT GGTCGGCATC CGGTTGCGCC GGGGATTGCT CACCGTCGTC
GACGCCACGA ATGTGCAGCG CCCCGCCCGG GCGTCGCTGG TCCAGTTGGC CCGTGACCAT
GATGTCCTCG TCGACGCGAT CGTGTTCGAC CTGCCCGACG AGATCGCAGT GGAGCGCAAC
CGGCAGCGCC CGGACCGGAA CTTCGGCTCG CAGGTCGTGA CCCGGCAGGG CCGCGAGATG
CGCAAGTCGC TCAGGGGGAT CAAGAAGGAG GGCTTCCGAC GGGTGCACAC GCTGCACACG
CCCGACGAGG TCGCCGCCGT CGAGATCACC CGCGAGCGGC CGTGGAACGA CCGTACCGAA
CTCACCGGAC CGTTCGACGT GATCGGCGAC GTCCACGGCT GCGCCGCGGA GCTGCGCACG
CTGCTCACCG AGCTCGGATG GACGGTGCGG GCAGACGGCG CCGAGCACCC GGACGGCCGC
ACCGCCGTCT TCGTGGGGGA TCTCGTGGAC CGCGGACCGG ACACCCCGGC GGTGCTGCGC
CTGGTCATGG GCATGGTCGA CGCGGGAACT GCCTTGTGCG TCAGTGGTAA TCACGAGGCC
AAGCTGGTGC GTGCGCTCAA GGGCAACCGG GTCACCGTGG CGCACGGCCT CCAGGAATCA
CTCGACCAGC TGGCCGCCGA GACCGAGGAG TTCCGCACCG CCGCCACCCG CTTCATGGAC
GGTCTGCTCA GCCACTACGT CCTCGACCGT GGGCGGCTCG TCGTGGCACA CGCGGGTCTG
AAGCAGGAGT ACCAGGGCCG CGCCTCGCGG CGGGTCCGTG CGTTCGCGCT CTACGGCGAC
ACCACCGGGG AAACGGACGA GTTCGGGCTG CCGGTCCGGT ATCCGTGGGC GCGGGACTAT
CGCGGTTCCG CAGCGGTGGT GTACGGGCAC ACCCCGGTCA CCGAGCCACA GTGGCTCAAC
AACACCCTGT GCATCGACAC CGGTGCGGTA TTCGGTGGTG CGCTGACCGG GCTCCGCTAC
CCCGAACGCG AGATCGTCTC GGTTCCGGCG CAATCCCAGT GGTACGAGCC GGCCCGCCCG
GAGCAGGTGG AGCAGAGCGA CGACCGTGCC GGCTCAGTAC TCCGGTACGA CGACGTCGCC
GGAACCCGGT GGCTGTCGAC CCGCACGGGC GGTCGCGTCA AGGTCGACGC GGAGGGTGCT
GCGGCGGCGC TGGAGGTGAT GAGCCGGTTC GCAGTCGACC CGCGCTGGCT GATCTATCTG
CCGCCCACGA TGTCTCCGGC GTCGGTATCG CGCCACGAGG ACTATCTGGA GCACCCGGTG
TGCGCGTTCG ACGACTTCGC GGGCTGGGGT GTGGAGCGGG TGATCTGCGA GGAGAAGCAC
ATGGGATCCC GCGCGATCGC CGTGATCGCT CGCGACGCCG ACGTCGCGGC CTGGCGTTTC
GGTGTGGCCG ATGGGAGCAG TGGGGCGGTG TACACCCGCA CCGGGCGGTC TTTCGTCGAA
GACTCCGCGT CGCTCGTCGA CCGCATCCGC GGCGCCGTGG CACCGCTCTT CGATCGGCTG
GACACCGAAT GGCTCGCACT GGACTGCGAG ATCCTGCCCT GGTCCGCCAA AGCGGAGGGA
CTGATCGTGG ATCAGTACGC GTCGGTGGGC GCGGCTGCGC GAGAAGCGTT GCCGGTTGCG
CTCGCGGGGC TCGACGCCGC CGCGGCGCGT GGGCTCGACG TTGCGGGACT GCGCGCACGA
ACGGTCCGCC GGCAGGTGAA CGCGGTGGCC TTCCGCGACG CCTACGCCGC GTACTGCCGT
CCGATCGATG GCCTCGACGG TGTCACGGTG GCGCCCTTCC AGGTACTCGC CGCCGAAGGC
CGGGTCCTGG CGACCGAATC ACACGAATGG CACCTGGATC TCATGGGCGC ACTGGAGGAT
CCGTTCCTCA CTCATACCCG GCACCGCATC GTGGATCTCT CGTCGGAGGC CGACCGTGCC
GCCGCGGAGC GGTGGTGGAC AGGGCTCACC GACGCAGGCG GAGAGGGAAT GGTGGTCAAG
CCCCTCGGTG CGACCGGGCG AAAGGTGCAG CCGGGTTTGA AGGTCCGTGG TCGCGACTAC
CTGCGGATCA TCTACGGTCC GGACTACGTC GACTCGCTCG ATGTGCTGCG GGACCGGAAC
CTGGGCCGCA AGCGGAAGAT GGCCCTTGCG GAGCACGCCC TCGGGATGGA TGCGCTGGCG
TCGTTCGTTG CGGGGGAGCC GTTGTGGCGG GTGCACCAGT CCGTGTTCGC GGTGCTCGCG
CAGGACTCCG AGCCGGTCGA TCCCCGGCTC TGA
|
|---|
| Protein sequence | MPDTTVAVPA RGLILLVGAS GSGKSTFARE HFRATEVVSS DVCRGLVADD ENDQSATPDA
FDLLHHLVGI RLRRGLLTVV DATNVQRPAR ASLVQLARDH DVLVDAIVFD LPDEIAVERN
RQRPDRNFGS QVVTRQGREM RKSLRGIKKE GFRRVHTLHT PDEVAAVEIT RERPWNDRTE
LTGPFDVIGD VHGCAAELRT LLTELGWTVR ADGAEHPDGR TAVFVGDLVD RGPDTPAVLR
LVMGMVDAGT ALCVSGNHEA KLVRALKGNR VTVAHGLQES LDQLAAETEE FRTAATRFMD
GLLSHYVLDR GRLVVAHAGL KQEYQGRASR RVRAFALYGD TTGETDEFGL PVRYPWARDY
RGSAAVVYGH TPVTEPQWLN NTLCIDTGAV FGGALTGLRY PEREIVSVPA QSQWYEPARP
EQVEQSDDRA GSVLRYDDVA GTRWLSTRTG GRVKVDAEGA AAALEVMSRF AVDPRWLIYL
PPTMSPASVS RHEDYLEHPV CAFDDFAGWG VERVICEEKH MGSRAIAVIA RDADVAAWRF
GVADGSSGAV YTRTGRSFVE DSASLVDRIR GAVAPLFDRL DTEWLALDCE ILPWSAKAEG
LIVDQYASVG AAAREALPVA LAGLDAAAAR GLDVAGLRAR TVRRQVNAVA FRDAYAAYCR
PIDGLDGVTV APFQVLAAEG RVLATESHEW HLDLMGALED PFLTHTRHRI VDLSSEADRA
AAERWWTGLT DAGGEGMVVK PLGATGRKVQ PGLKVRGRDY LRIIYGPDYV DSLDVLRDRN
LGRKRKMALA EHALGMDALA SFVAGEPLWR VHQSVFAVLA QDSEPVDPRL
|
|---|
| |