| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0465 |
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| Symbol | |
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| ID | 9154601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 490277 |
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| End bp | 493672 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | protein of unknown function DUF224 cysteine-rich region domain protein |
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| Protein accession | YP_003645445 |
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| Protein GI | 296138202 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACACCG ACACATTGGC CGCCGGTGCG GCTGAGACCA ACGCGTTGAC CCTGACTCTG
GGCACCATCG GCGCGATCGC TTTCGCTCTC GGGTGGGTGG TGTTCTTCCG CGGGGCACTG
CGCATGGTGC GGATCATCGC CAAGGGGCAG CCCGCGCCCG ACCGCTGGAC GCCGTTCATC
CCGCGCGCCG CGGAGGTGGT GGTCGAGTTC CTCGCCCACA CCAAGATGAT CAAGAACCGC
ACCGTGGGCA TCGCCCACTG GCTGGTGATG ATCGGCTTCC TCGCGGGCGC CATCCTGTGG
TTCGAGGCCC TCCCGCAGAC CTTCGACCCG TCGTTCCACT GGCCCGTCAT CGGCTCGTGG
CCGGTGTACC GCCTGATGGA CGAGCTGCTC GGTATCGGCA CCGTCGTCGG CATCGTCGTG
CTGATCGTCA TCCGCCAGAT CAAGCACCCC CGCAACCCCG AGCTGTTCTC CCGGTTCGCC
GGCAGCAAGT TCCTGCCCGC GTACACGATC GAGGCCATCG TCTTCGTCGA GGGCTTGGGC
ATGATCCTGG TGAAGTCGAG CAAGATCGCC ACCTACGGCG ATGCCGACCC GATCACCGAC
TTCTTCACCC GCCAGGTGGC CACGCTGCTG CCCGCCAGCC CGAACCTGAT CACAGTCTTC
GCCTTCATCA AGCTGATGTC CGGCGTGATG TTCCTGCTTC TGGTGGGGAG CAACCTCACC
TGGGGCGTCG CATGGCACCG GTTCTCCGCG TTCTTCAACA TCTACTTCAA GCGCGAGCTG
GGCAGCCGCC GCGCGCTCGG TGCCGCGAAG CCGATGATGT CGGACGGCAA GGTGCTCGAG
ATGGAGACCG CCGACCCCGA CACCGATGCC TTCGGCGCCG GCAAGATCGA GGACTTCTCC
TGGAAGGGCT GGCTCGACTT CACGACCTGT ACCGAGTGCG GTCGCTGCCA GAGTCAGTGC
CCCGCCTGGA ACACCGGAAA GCCGCTGAGC CCGAAGCTGC TCATCATGGG TCTGCGCGAC
CACGGCTTCG CCAAGGCTCC CTACCTCCTG GCCGGTGGCA GCACCGATAT GGGAGGCGAC
GAGACCGGCC TCGTGGACGC CGACGGCAAC CCGGACGAGA CCAAGCTGGG CAAGATCCCC
GCGGAGGCGC GCGCCGAGGC GGCCCGTCCG CTGGTCGGAC CGGCCGGTGA GGGCGACGAC
CTCGGCGGCG TCATCGACCC CGAGGTGCTG TGGAGCTGCA CCACCTGCGG CGCCTGCGTC
GAGCAGTGCC CCGTGGACAT CGAGCACGTG GACCACATCG TCGATATGCG CCGCTACCAG
GTGCTCATCG AATCGGAGTT CCCGCACGAG CTGGCCGGCC TGTTCAAGAA CCTCGAGAAC
AAGGGCAACC CCTGGGGCCA GAACTCCAGC CAGCGCACCG CGTGGATCGA CGAGATGGAC
ATCGACATCC CGGTCTACGG CGAGCACACC GATTCCTTCG ACGGATACGA ATACCTGTTC
TGGGTCGGCT GCGCCGGTGC CTACGAAGAC CGCGCCAAGA AGACCACCAA GGCCGTGGCC
GAGCTGCTCG ACGTGGCCGC GGTGAACTTC CTGGTCCTGG GCCAGGGCGA GACCTGCACC
GGCGACTCGG CCCGCCGCGC GGGCAATGAG TTCCTGTTCC AGATGCTGGC GCAGCAGAAC
ATCGAGCAGC TCAACGAGGT GTTCGACGGC CTGCCGGTGA ACCAGCGCAA GATCGTGGTC
ACCTGCGCGC ACTGCTTCAA CGCCCTCGGA AACGAGTACC CACAGGTGGG CGGCCAGTAC
GAAGTGGTCC ACCACACCCA GTTGTTGAAC AAGCTGGTCC GCGAGAAGCG CCTCGTTCCG
GTGGCGCCCC CGAGCGAGGA CGTGACCTAT CACGACCCGT GCTACCTGGG CCGCCACAAC
CAGGTCTACG AGGCTCCGCG CGAGCTGATC GGCGCCTCCG GCGCGACGCT GAAGGAGATG
CCGCGGCACC TCGAACGGTC CATGTGCTGT GGCGCCGGCG GCGCGCGCAT GTGGATGGAG
GAGCAGCTCG GCAAGCGCAT CAACATCGAC CGGGTGGACG AGGCGCTCGA GACACTGTCC
TCGACGCCCG AGGCGTCGCC GAAGAAGATC GCGACCGGCT GCCCCTTCTG CCGCGTGATG
CTCTCCGACG GTGTGACCGC GCAGACCGCG GATTCGGACG CTCCGGCGCC CGAGGTGGTC
GATGTGGCGC AGATGCTGCT CGAGTCGGTC AAGCGCGGTC TGCCGGACGG ACTGGTGCGG
GGGAACCCGA ACCGCAAGAC CGACGGTGCC GCCCCCGCGG AGGTGCCCAC CGAGGCACCG
GCCGAGGTCG AGGAGGCTCC GGCGGCGACC GCGGCGGCAA CCACGGCCGA GCCTGCGGAG
AAGAAGGACG CCAAGCCGAC GGTGGGCCTG GGCCTGGCCG GGGGCGGCAA GCGCCCCGGA
GCTCCGAAGA AGCCGGGCGG CGCCCCCAAG CCGGGCGGCG CGGCTCCCGC GGCGGAGGCG
GCCGAACCCG CAGCGCCCGC CGCACCGGCC AAGCCGGCCG TCGGGCTCGG CCTCGCCGGT
GGCGCCAAGC GCCCCGGTGC CCCGAAGCCG GGTGGCGCCA AGCCTGCGGC CGCGGCCCCC
GCTGCGGAGA CACCGGCCGA GACGGCCGCT GAGACCCCCG CGGCTCCCGC CGCACCGGCT
AAGCCGGCCG TGGGCCTCGG GCTGGCCGGC GGCGCCAAGC GTCCGGGAGC GAAGAAGCCG
GGAGCTCCTA AGTCCCCGGC AGCAGCGGCT CCGGCCGAGG CACCCGCAGC CGAGCCCACC
GCGGCTCCGT CCGCCGCCCC CGCAGCGGAT GCTCCCGCCG AGGACCGCAC GCTGAGCACC
GCCGGTGAGT CCAAGGCCGC GGGCTTCGGC ATCGCCGCGG GCGCCAAGCG TCCGGGACCG
AAGAAGCCGG GGGCGCCCAA GCCCGCGGCC GCGGCCCCGG CCGCACCGGA GACCGCAGCT
CCTGAGGCAG CCGCACCCGA AGCTCCGGCT GCTCCCGCCG CCGAGGCTCC CGCTGCTCCC
GCCGAGGACC GCACGGTGAC CACCGCCGGT GAGTCCAAGG CCGCGGGCTT CGGCATCGCC
GCGGGCGCCA AGCGCCCCGG AGTGAAGAAG CTGGGCGGCG AGATCAAGGA GAAGGTCGCC
GAGGCACGTA CCGAGGTGCG CGAGCACACC GAGCACAAGA CCGAGCCCGA GGCACCGTCG
GCCGCGGAGC CCGAGCAGCC TGAGGCACCG GAAACTCCCG CGGAGGCCCC GAAGGCCTCG
TCGGGCGACG ACCGGAGCCT GGCGGAAAAG GGTGAGTCGA AGGCGAAGGG CTTCGGCATC
GCCGCGGGCG CCAAGCGCCC CGGCGGACGC AAGTGA
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| Protein sequence | MDTDTLAAGA AETNALTLTL GTIGAIAFAL GWVVFFRGAL RMVRIIAKGQ PAPDRWTPFI
PRAAEVVVEF LAHTKMIKNR TVGIAHWLVM IGFLAGAILW FEALPQTFDP SFHWPVIGSW
PVYRLMDELL GIGTVVGIVV LIVIRQIKHP RNPELFSRFA GSKFLPAYTI EAIVFVEGLG
MILVKSSKIA TYGDADPITD FFTRQVATLL PASPNLITVF AFIKLMSGVM FLLLVGSNLT
WGVAWHRFSA FFNIYFKREL GSRRALGAAK PMMSDGKVLE METADPDTDA FGAGKIEDFS
WKGWLDFTTC TECGRCQSQC PAWNTGKPLS PKLLIMGLRD HGFAKAPYLL AGGSTDMGGD
ETGLVDADGN PDETKLGKIP AEARAEAARP LVGPAGEGDD LGGVIDPEVL WSCTTCGACV
EQCPVDIEHV DHIVDMRRYQ VLIESEFPHE LAGLFKNLEN KGNPWGQNSS QRTAWIDEMD
IDIPVYGEHT DSFDGYEYLF WVGCAGAYED RAKKTTKAVA ELLDVAAVNF LVLGQGETCT
GDSARRAGNE FLFQMLAQQN IEQLNEVFDG LPVNQRKIVV TCAHCFNALG NEYPQVGGQY
EVVHHTQLLN KLVREKRLVP VAPPSEDVTY HDPCYLGRHN QVYEAPRELI GASGATLKEM
PRHLERSMCC GAGGARMWME EQLGKRINID RVDEALETLS STPEASPKKI ATGCPFCRVM
LSDGVTAQTA DSDAPAPEVV DVAQMLLESV KRGLPDGLVR GNPNRKTDGA APAEVPTEAP
AEVEEAPAAT AAATTAEPAE KKDAKPTVGL GLAGGGKRPG APKKPGGAPK PGGAAPAAEA
AEPAAPAAPA KPAVGLGLAG GAKRPGAPKP GGAKPAAAAP AAETPAETAA ETPAAPAAPA
KPAVGLGLAG GAKRPGAKKP GAPKSPAAAA PAEAPAAEPT AAPSAAPAAD APAEDRTLST
AGESKAAGFG IAAGAKRPGP KKPGAPKPAA AAPAAPETAA PEAAAPEAPA APAAEAPAAP
AEDRTVTTAG ESKAAGFGIA AGAKRPGVKK LGGEIKEKVA EARTEVREHT EHKTEPEAPS
AAEPEQPEAP ETPAEAPKAS SGDDRSLAEK GESKAKGFGI AAGAKRPGGR K
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