| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0454 |
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| Symbol | |
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| ID | 9154589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 477655 |
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| End bp | 479139 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003645434 |
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| Protein GI | 296138191 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.507724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTACCG ACCAGAATGT GAGCGCCGAT CACGCACTCG GCGCCGAGGA CGAGGGTTAT
CAGAAGTCGC TCACCCCTCG ACAGCTGCAA ATGATCGCCA TTGGTGGAGC CATCGGCACC
GGCCTGTTCC TCGGGGCCGG CGGACGTCTC AATTCCGCTG GACCGGGACT GTTCCTGGTG
TACGGGATCT GCGGAGTCTT CGTCTTCTTC ATCCTGCGCG CGATGGGCGA GTTGGTACTG
CACCGGCCCT CGTCGGGATC GTTCGTCTCG TACGCGCGGG AGTTCTACGG CGAGAAGGCC
GCCTATGTCG CGGGCTGGAT GTACTTCCTG AACTGGGCGA TGACGTCGAT CGTCGACTCC
ACCGCGATCG CCCTGTACCT CCACTTCTGG GGGCCGATGC GGGTGATCCC TCAGTGGGCC
TTCGCCTTGC TGGCGCTGGC CGTGGTGCTC ACCATGAACC TCATCTCGGT CAAGCTCTTC
GGTGAGCTCG AGTTCTGGGC CGCGCTGGTG AAGGTGGTCG CGCTGACGGC GTTCCTGGTG
GTCGGCACGA TCTTCCTGAG CGGCCGGTTC ACGATCGAGG GCCAGCGCAC CGGGTTGTCG
GTGATCTCCG ATAACGGTGG CTGGTTCCCG CACGGCATCC TGCCGTTGGC GGTGGTCACC
TCCGGTGTGG TCTTCGCATA TGCGGCGGTC GAACTGGTGG GCACCGCGGC GGGGGAGACC
GAGAATCCCC GCAAGGTGAT GCCCAAGGCC ATCAACACGG TGATCTTCCG CATCGCGATC
TTCTACTGCG GTTCGCTGTT GTTGCTCGCG CTGCTGCTGC CGTGGTCGTC GTACAAAGAC
GGCGAGAGCC CGTTCGTCAC CTTCTTCTCC AAGCTCGGCT TCAGCGAGGC CGGATCGATC
ATGAACCTGG TCGTGATCAC CGCCGCACTG TCCTCACTCA ACGCGGGTCT GTACTCGACC
GGGCGGATCC TGCGATCGAT GTCGGTCAAC GGCAGCGCGC CGAAGTTCAC CTCACGGATG
TCGCGCAACG GAGTGCCCTA CGGCGGCATT CTGCTGACCT GCGTGTTCAC ATTGGGGGGC
GTCCTGCTCA ACGCGTTCAA CCCGGGTCAA GCATTCGAGA TCGTGCTCAA TATCTCCGCG
CTCGGCATCC TGGGCGCCTG GGCCACGATC GTGTTGTGCC AGCTCAAGTT GTACTACGAG
GCCAAGGCCG GTCGCATCGA TCGGCCTGCG TATCGGCTGT TCGGCGCGCC CTACACCGGC
TATGTGACCC TCGCCTTCTT GGCGATCGTG CTGGTACTGA TGGCATTCGA CACCCCGATC
GGCACCTGGA CGGTAGCCAG CCTGCTGGTG CTGATCCCGA TGCTCATCGT CGGCTGGTAC
GCCGTGCGCG GCAGGGTCGC CGAGGCGGCG GCTGCGCGCG ACGGATACAC CGGGACCTTC
CCGGTGATCG CGGAACGTCC GAGCCCGCGG GATAAGCGGC GCTGA
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| Protein sequence | MSTDQNVSAD HALGAEDEGY QKSLTPRQLQ MIAIGGAIGT GLFLGAGGRL NSAGPGLFLV
YGICGVFVFF ILRAMGELVL HRPSSGSFVS YAREFYGEKA AYVAGWMYFL NWAMTSIVDS
TAIALYLHFW GPMRVIPQWA FALLALAVVL TMNLISVKLF GELEFWAALV KVVALTAFLV
VGTIFLSGRF TIEGQRTGLS VISDNGGWFP HGILPLAVVT SGVVFAYAAV ELVGTAAGET
ENPRKVMPKA INTVIFRIAI FYCGSLLLLA LLLPWSSYKD GESPFVTFFS KLGFSEAGSI
MNLVVITAAL SSLNAGLYST GRILRSMSVN GSAPKFTSRM SRNGVPYGGI LLTCVFTLGG
VLLNAFNPGQ AFEIVLNISA LGILGAWATI VLCQLKLYYE AKAGRIDRPA YRLFGAPYTG
YVTLAFLAIV LVLMAFDTPI GTWTVASLLV LIPMLIVGWY AVRGRVAEAA AARDGYTGTF
PVIAERPSPR DKRR
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