Gene Tpau_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0424 
Symbol 
ID9154559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp447510 
End bp448115 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003645404 
Protein GI296138161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.315635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGGTG GAACGAAGCG TTTGCCGCGC GCGGTGCGCG AGCAGCAGAT GCTCGACGCC 
GCTATCAAGG TGTTCTCCCG CAACGGGTTC TACGAGACGT CGATGGACGC CGTGGCCCGC 
GAGGCGGAGA TCAGCAAGCC GATGCTGTAC CTGTACTACG GGTCCAAGGA TGAGCTGTTC 
GCCGCGTGTG TCACCCGTGA GGTGGGCCAT TTCATGCGGA GCATCGAGTT CGATGCCACC 
CCCGCCCTTC CGCCTTCGCA GCGCTTACGG TCGGTGATCG AAGGCTTCCT CAAGTACGTG 
GACCAGAACC GCGACGCCTG GCGTGTGATG TACCGCGAGG CGAGCGGCCA GGCGTCCTTC 
GCCACGCTCG TCGAAGCCAA TCGCGAGCGG GTGGTCGAGA TGACCGCGGT TCTCCTGCGG 
GAGGCCGCGA AGTACGCGCC CGAGGACACC GATTTCGAGC TCTACGCCGT CGCCCTGGTC 
GGCTCCGGCG AGGCCATCGC CGATCGTCTC GCTACCGGGA AGGTCGAACT CGACCGCGCC 
GTGGAGATCA TGACCTCCTT CCTGTGGGGC GGCATCCGCG GCGAGCGCCC GGAAGACGGC 
AAGTAG
 
Protein sequence
MAGGTKRLPR AVREQQMLDA AIKVFSRNGF YETSMDAVAR EAEISKPMLY LYYGSKDELF 
AACVTREVGH FMRSIEFDAT PALPPSQRLR SVIEGFLKYV DQNRDAWRVM YREASGQASF 
ATLVEANRER VVEMTAVLLR EAAKYAPEDT DFELYAVALV GSGEAIADRL ATGKVELDRA 
VEIMTSFLWG GIRGERPEDG K