Gene Tpau_0396 details

Gene Information

• Locus tag: Tpau_0396
• ID: 9154531
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 413835
• End bp: 414623
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 67%
• Product: ABC transporter related protein
• Protein accession: YP_003645376
• Protein GI: 296138133

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0709854
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCAAC CCGGTGCGTC TGGCAAGCTC GATGACATGT CCGAATCTAC TTTCGCGGTG 
GCCGCCCGAG CCGTCGATCT GACCAAGGTC TACGGCGAGG GCGACAACGT GGTGCACGCG 
TTGGCCGGAG TCTCCGTCGA CTTCCTCACG GGCGAGTTCA CCGCGATCAT GGGGCCCTCG 
GGCTCCGGCA AGTCCACGTT GATGCACTGT CTGGCCGGCC TGGACACGGC CAGCAGTGGA 
TCAGTGCAGG TGGGCGGCAC CGAGCTCACT TCACTCAGCG ATAAGCAGAT CACGGAGCTG 
CGGCGCGACC GGATCGGTTT CGTCTTCCAG GCGTTCAACC TGGTGCCCAC GCTCACCGCG 
CTGGAGAACA TCACCCTGCC GCTCGACATC GCCGGCCGCA AACCCGACCA GCAGTGGCTC 
GATACCGTCG TCGACCGACT CGGCCTGCGC CCGCGCCTGG ACCACCGGCC CACCGAGCTC 
TCCGGAGGCC AGCAGCAGCG CGTGGCCTGT GCCCGCGCTC TGGTCGGCAG GCCGGACATC 
ATCTTCGGCG ATGAGCCCAC CGGCAACCTG GACTCGCGAT CCGGCGCCGA GGTGCTGTCG 
ATTCTGCGGT CCGCGGTGAA CGACTTCCGG CAGACCGTGG TGATCGTGAC GCACGATCCG 
CGCGCCGCGT CCTATGCCGA CCGGGTGGTG TTCCTGGCGG ACGGGCGGAT CGTCGACGAG 
ATGCGCGGAC CGACCGCCGA AACGGTGATG GACAAGATGA TCCATCTCGA CGAGCTCGTG 
GGCGGCTGA 

 

Protein sequence

MPQPGASGKL DDMSESTFAV AARAVDLTKV YGEGDNVVHA LAGVSVDFLT GEFTAIMGPS 
GSGKSTLMHC LAGLDTASSG SVQVGGTELT SLSDKQITEL RRDRIGFVFQ AFNLVPTLTA 
LENITLPLDI AGRKPDQQWL DTVVDRLGLR PRLDHRPTEL SGGQQQRVAC ARALVGRPDI 
IFGDEPTGNL DSRSGAEVLS ILRSAVNDFR QTVVIVTHDP RAASYADRVV FLADGRIVDE 
MRGPTAETVM DKMIHLDELV GG