Gene Tpau_0334 details

Gene Information

• Locus tag: Tpau_0334
• ID: 9154469
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 345032
• End bp: 347185
• Gene Length: 2154 bp
• Protein Length: 717 aa
• Translation table: 11
• GC content: 73%
• Product: hypothetical protein
• Protein accession: YP_003645316
• Protein GI: 296138073

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTACCG AGGCGCAGCC GGGGCGAACG GTCGACGACG CGCCGCCGCA TCCCGAGGTG 
ACGCGGCTGC GGCGGCCGGT GTGGTTGAGC GTGACGCTGC GCCGCGCGTT GGTGTGGGCG 
GTGCTGTCGA CGGTCTTCGT CGCGCTCACC GCTGGTCGGT GGCCCACCTG GGCGGTGACG 
GCGATCCCGG TGATCGGCGC ACTCGTCGCG TTCGTCTCCG TGCACGGATC GGTGCTCAGC 
GAGCGGATCG CCGCACGGGC GCACTACCTC CGCAGACGCC GTGCGGGTTA CGACGGGCTG 
CCGGGCCGGG TGATCGACGT CGACGGCTGC GGTGTCCGCT GGGGTGACGG CTACGAGCTG 
GTGTCGGCGA TCGAGCTGAC CGCCGACCTC GCCGAGACCC GGTTACGGGA CGGCCGCGCG 
TACGCCGCGG ACACCGTGCC CCTCGATCTG CTGGCATCGA TGATGACCCA GTACGGCCTG 
AACGTCGACA TCGATGTCTC CTCCGCCGGT CGCCGCGTAC CTCCGGGACC GGCGTACCGC 
GCCTCCTATG CACAGGGCGT GCGGTTCTAC TCCGCGATGG CCGAGCGCTC CACCTGGCTG 
ATCCTCCGGG TGAACACCCG CCGCAATCTC GCCGGCATCG TGCGCCGCGG TCCATCGCGC 
ACCGCGGGGC CCACAGCGCT CATGGCCGCC ACCCGGCGGC TCGAGCAACG CCTGCACGAG 
CGCCGCATCC GGGCGCGGAT TCTGCCGCCC GCGGAACTCG CCCAGCTGGA TTCGCTGCTG 
TCCTTCGGTG CCGATGCGCG CCGCGGTGAG GAGCAGTGGA ATCACGTCTC CTACGGAAAT 
TCCTATGCCA CCACGTACTT CGTCGATCCC GGCCGGATGT CCACGGAGAA GCTGGACCGG 
TGGTGGGGTC TGGACACCGA CAGCACCGCC GTGGTGCTGC GGCTGCGCAA GCGGTCCGCC 
CAGGCACCCG TCGAGATCAG CGGGCTGGTG CGATACGACA CCGCGACACC GCAGATCGAC 
AACCACGACG ATTCGCTGAT CCTGGTGGCG GGCCGCCAGC GAGAACTGGC GCTGGCGACG 
CTACCGGGCG GGGCCACCAG CGTCGCCGAC CTCCCCTCGG CTCCGCTCAC GAAGCTGGCC 
GCCGTCGAGA TTCCGGTCGG TCCAGCGGGC CCGGTCTGGG GCATCGCCGA CGGTGCCGCC 
ATCGCGCTAC CGCTCTTCGA CGGCTCGCCG GTGCCCGAGA CCCTGCAGGT CGAGTTCGCG 
TCCGATCTGA CGGTGGTGCA ACTGATCCTG TTGCGTTCGG TGGGTGCGGG CGCCTCCGTG 
GCGGTGCGTA CCGAGCGGCC CGATCGCTGG CTGATGCTGG CGAACACGCT CGCCGACCCC 
TCCCGGTTCC GGATCGTCGA CGCCGGCGAC CGGAGGCCGG CCGACATCAC CGTTTTCGAT 
GGGGTCGAGG TGGACGCGGT GCCGGAGCGC ACTCTGCTCA CCGTGCACGG CGCGGGATCC 
GAACTCGGTG ACAAGGCCGA TGTCACCGTC GCGCAGACCA CCCAGTCCAA GGTGATCGTG 
CGGATCGGCC GGCGGGCTCC GATCGAGATG GTGCTCAACC CGACCGATGA AGAGTTGCGG 
TACTGCGACG TGGTGGTGCC GCCGTTGGCG TCCACCGCGG GCGAGCTCCC GGTGCAGCAG 
CGGCAACCGC GGCAGCCCCC GGCACCGCCC CGGCACGTGC CGACCGCACC GCCCGCACCG 
TGGTCGCGGG CGATCCCGCA GTCCGCACCG CCGGCGCCGC GCCCGGTTCC GCCCGCAGTG 
CCGCCGGCTG TTCCACCGGC CGTGCCGCCG GCTGCGCAAC CCGCCGGGGC ACAGCAAGCG 
GTGCCCCCGG TTCCGCCGTC CGGAGCGCCG GCCCCCGCCG TTCCCGCAGC GGGTCTCCCG 
CCGCAGGGCG CACCGCAGCA GCCGCGCATC CGGAGGCCGG TCCGGCCCGC GCCGCCCCCG 
CCCTTCGAGC GGGGGAGCGG GGCGCAGCGC AAGACCGACG CCGGCCGGTG GGTTCGCCGC 
GGCCGTGACG ACGAGCCCGG CGGCCCCGCT CGCCGGCCCC GCCGGGAACC GGGCGCCCCA 
CGCTGGGCGC AGCCCAAGGA CGAACCGCCC GGTCCGCCGC CAACCTCGCG TTAA 

 

Protein sequence

MTTEAQPGRT VDDAPPHPEV TRLRRPVWLS VTLRRALVWA VLSTVFVALT AGRWPTWAVT 
AIPVIGALVA FVSVHGSVLS ERIAARAHYL RRRRAGYDGL PGRVIDVDGC GVRWGDGYEL 
VSAIELTADL AETRLRDGRA YAADTVPLDL LASMMTQYGL NVDIDVSSAG RRVPPGPAYR 
ASYAQGVRFY SAMAERSTWL ILRVNTRRNL AGIVRRGPSR TAGPTALMAA TRRLEQRLHE 
RRIRARILPP AELAQLDSLL SFGADARRGE EQWNHVSYGN SYATTYFVDP GRMSTEKLDR 
WWGLDTDSTA VVLRLRKRSA QAPVEISGLV RYDTATPQID NHDDSLILVA GRQRELALAT 
LPGGATSVAD LPSAPLTKLA AVEIPVGPAG PVWGIADGAA IALPLFDGSP VPETLQVEFA 
SDLTVVQLIL LRSVGAGASV AVRTERPDRW LMLANTLADP SRFRIVDAGD RRPADITVFD 
GVEVDAVPER TLLTVHGAGS ELGDKADVTV AQTTQSKVIV RIGRRAPIEM VLNPTDEELR 
YCDVVVPPLA STAGELPVQQ RQPRQPPAPP RHVPTAPPAP WSRAIPQSAP PAPRPVPPAV 
PPAVPPAVPP AAQPAGAQQA VPPVPPSGAP APAVPAAGLP PQGAPQQPRI RRPVRPAPPP 
PFERGSGAQR KTDAGRWVRR GRDDEPGGPA RRPRREPGAP RWAQPKDEPP GPPPTSR