| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0201 |
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| Symbol | |
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| ID | 9154335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 213125 |
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| End bp | 215461 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | DNA polymerase LigD, polymerase domain protein |
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| Protein accession | YP_003645194 |
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| Protein GI | 296137951 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.173659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCAGA CTCGGGAGAA CCGTGAGGTG GACGGCGTCC ACGTGCAACT GACCAACCTC
GACAAGGTGC TCTACCCGGC CACCGGTACC ACGAAGGCCG AGGTGATCGA CTACTACCAG
GCGATCGCCC CCGTCGCGGT CCCCCACCTG CGCGACCGGC CGCTCACCCG CAAACGCTGG
CCCAACGGCG TCGATAAAAC CGCCTTCTTC GAAAAGCGCC TCCCCAGCCA TGCCCCGGCC
TGGATCCGCC GCGGCGCCCA GCACCACTCC GACGGCGAAT CGCTCTATCC CGTGGTCGAG
AACACGGCCG ATATGGTGTG GCTGGGACAG CAAGCCGCGC TCGAGCTCCA CGTACCGCAG
TGGACGTTCA TCGCCGACGG CGAGAACGAG GAGCCGGGCC CGCCCGATCG CCTGGTCCTC
GACCTCGATC CCGGCCCCGG CAGCACGCTC GACGATTGCG CCGCACTCGC GCTGCGCATC
CGCGATCTGC TCGCAGCCAT GGGACTGGAC GGGCACCCGG TCACCAGCGG CTCCAAGGGC
ATGCACATCT ATTCGACCTT GCCCGGCGGC CTCAGCAGCC CGGGCGCGCG GAAGGTGGCG
CACGCCATCG CGTCCCAACT GGAGGCCGAG TCACCGGAAC TGGTGACCGC CTCCATGTCG
AAGGACCAGC GCGGGGGCCG CATCTTCGTG GACTGGTCGC AGAACAGCGG ATCCAAGACC
ACGATCTCGC CGTATTCGCT ACGCGGGCGC GAGCATCCGT GGGTGGCGGC ACCCCGCAGC
TGGGACGAAC TGTCCCGGCC GGGCTTGCAG CAGTTGGAGT TCCACGACGT GCTGGCCCGC
GTGCGGACGA GCGGCGATCT GCTCGCTCCA TTGCTCTCGG GCACACCGGC ACCGCCCGAG
CCGGTCGACC TCGACGAATA CCGGGCTAAG CGCGATGCCG CGAAGACGCC GGAACCCTTC
GGCGGCGCGG CGAGCACGGG CGATCCGATC TTCGTGATCC AGGAACATCA CGCGCGCCGC
CTGCACTACG ACTTCCGCCT GGAACACGAC GGCGTACTCG CTTCCTGGGC GGTGCCGAAG
AACCTGCCCG ACGATCCCGC GGTGAACCAC CTGGCCGTGC GCACCGAGGA CCACCCGATG
GACTACGCCG CCTTCGAGGG CAGCATCCCG AAGGGGGAGT ACGGCGGCGG CGATGTGAGC
ATCTGGGACC ACGGCACCTA CGAACTGGAG AAGTGGCGCA AGGACGAGGT GATCGTCACG
CTGCACGGCG CGCGACTGCG CGGACTGCGC TACGCCCTCA TCCGCACGGG CGAAAAGAAT
TGGCTCGCTC ACCTGACCAA GGACAAGACC GCACCGGCGA AGGCCGCGGC AGCGCAAGCA
CCGGATCCGA TGCTGCCCAG CGAATCCACG ATCGACCGGC TCTCCGGCGA GGATTGGGCC
TTCGAGGGCA AGTGGGACGG CTACCGGATC ATGGCGACGG TGCGCGGCGG CGCGCTGAGC
CTGCGCACCC GATCGGGCCG GGTTGTCACC GGTGAGTTCC CCGAATTCGA GTCACTGGCC
CGCGATCTCG ACGGAATGGA CGTGGTCCTC GACGGTGAAG CTGTAGTGCT CGACGATGCG
GGCGTACCGT CGTTCCACCT CATGGCGGGG GGCGAGAGCC GTACCGGCGC GGTACGGCTC
TACCTGTTCG ACGTCCTCGA ACTGAACGGT GTCGACCTCA CCAAGCGGCC CTGGTCAGTG
CGGCGGGAGG TATTGGAAAG TCTTGCACCA CTTCTAGATT CCGACGACTC GATCGGCGTT
CCAGCATTGG TCGAGGCCTC CACGGGACTG GTGGCCGCGA CCCTGAGCGC GGAACGGGGA
TGGGAGGGGA TCGTCGCCAA ACGTCGCGAC TCGCCGTATC TGCCCGGACA GCGGGTGCGG
GCCTGGCTCA AACACAAGAA CTGGCGCGAT CTGCAGGTGG CGATCGGCGG CTGGAAGCCG
GGGAAGGGTT CGCGCGCGAA CCGGATCGGA TCCGTCCTGG TGGGTCTGCC CGCGGAGACC
GGTCTGGTCT ATCTGGGCTC GGTGGGGTCG GGCTTGCGCG ACCGCGATCT GGACGCGCTC
GCGCAGCGAC TGGAACCGCT GCGAATGAAG CGCTCCCCGT TCACCGCCTC CATCGACGAT
CCGGACGCTC GCGATGCCGT GTGGGTGTTG CCTCAGGTGG TGGGTGATGT CCGCTATTCC
TCGCTCCGCA GGGGCGGGCA CCTGCGGCAG CCCAGCTGGC GCGGTTTCCG CGACGATCTG
CTCCCGGGCG ACCTCCCCGG CGAGGCGGAG ATCCCGTGGG AGGGGCCCGA CGAATAA
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| Protein sequence | MAQTRENREV DGVHVQLTNL DKVLYPATGT TKAEVIDYYQ AIAPVAVPHL RDRPLTRKRW
PNGVDKTAFF EKRLPSHAPA WIRRGAQHHS DGESLYPVVE NTADMVWLGQ QAALELHVPQ
WTFIADGENE EPGPPDRLVL DLDPGPGSTL DDCAALALRI RDLLAAMGLD GHPVTSGSKG
MHIYSTLPGG LSSPGARKVA HAIASQLEAE SPELVTASMS KDQRGGRIFV DWSQNSGSKT
TISPYSLRGR EHPWVAAPRS WDELSRPGLQ QLEFHDVLAR VRTSGDLLAP LLSGTPAPPE
PVDLDEYRAK RDAAKTPEPF GGAASTGDPI FVIQEHHARR LHYDFRLEHD GVLASWAVPK
NLPDDPAVNH LAVRTEDHPM DYAAFEGSIP KGEYGGGDVS IWDHGTYELE KWRKDEVIVT
LHGARLRGLR YALIRTGEKN WLAHLTKDKT APAKAAAAQA PDPMLPSEST IDRLSGEDWA
FEGKWDGYRI MATVRGGALS LRTRSGRVVT GEFPEFESLA RDLDGMDVVL DGEAVVLDDA
GVPSFHLMAG GESRTGAVRL YLFDVLELNG VDLTKRPWSV RREVLESLAP LLDSDDSIGV
PALVEASTGL VAATLSAERG WEGIVAKRRD SPYLPGQRVR AWLKHKNWRD LQVAIGGWKP
GKGSRANRIG SVLVGLPAET GLVYLGSVGS GLRDRDLDAL AQRLEPLRMK RSPFTASIDD
PDARDAVWVL PQVVGDVRYS SLRRGGHLRQ PSWRGFRDDL LPGDLPGEAE IPWEGPDE
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