Gene Tpau_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0193 
Symbol 
ID9154327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp206711 
End bp207361 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003645186 
Protein GI296137943 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.296771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGGA TCGCGATCAT CGGCGGACAC GGCAAGGTGG CTCTCCTCCT GGCGCAGGTG 
CTCAGCGCCC GCGGCGACCA GGTGACCTCC TGGATACGCA ACCCCGAACA CGCCCCCGAT 
GTGACCGCCA CGGGCGCCAC CCCGCTGGTG CTCGACGTGG AGAACGCCTC GCGCGACGAG 
ATCGCGAACG CGTTGGCGGG CAACGACGCC GTGGTCTTCT CCGCCGGCGC AGGCGGAGGG 
AACCCGGACC GGACCTACGC CGTGGACCGG GATGCCGCGA TCCGGTCGGT GCAGGCCGCC 
GAGCAGGCGG GCGTGCGCCG CTACCTGATG GTCTCCTATC TGGGTGCGGC GCCCGATCAC 
GGTGTGCCCG AGTCTGATCC GTTCTTCCAC TACGCGGAAG CCAAGGCCGC TGCCGATGTG 
GCGGTGCGCG CCTCGGACTT GGATTGGACC GTACTGATGC CCGGCCGCCT CACGCTCGAC 
GAGCCTTCGG GCCGGGTCGA TCCGGCGGCC GAGCGCGCCG CCGACAACCC GGGTACCTCG 
CGGGCGAACG TGGCACTGGT CGCGGCGTCG GCGCTGGATC GCCCGGACAC CATCGGCAAG 
GACCTGCCTT TCACCGACGG CGACGTGACG ATCGAACAGG CGTGGGCGTA G
 
Protein sequence
MARIAIIGGH GKVALLLAQV LSARGDQVTS WIRNPEHAPD VTATGATPLV LDVENASRDE 
IANALAGNDA VVFSAGAGGG NPDRTYAVDR DAAIRSVQAA EQAGVRRYLM VSYLGAAPDH 
GVPESDPFFH YAEAKAAADV AVRASDLDWT VLMPGRLTLD EPSGRVDPAA ERAADNPGTS 
RANVALVAAS ALDRPDTIGK DLPFTDGDVT IEQAWA