Gene Tpau_0124 details

Gene Information

• Locus tag: Tpau_0124
• ID: 9154258
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 132482
• End bp: 133240
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 69%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003645117
• Protein GI: 296137874

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.087431
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGTCT CCGGCTCCTC CGTCATCGTC ACGGGCGGCG CTTCGGGCCT CGGTGCCGCC 
ACCGCCAAGC GCTTCGCCGA GGCCGGTGCC ACCGTCTTCG GCCTCGACCT GCAGCCCTCG 
ATCGATAAAG CCGCCCCGGT CGATAACGTG CACCTCATCG CCACCGACGT GACCAAGGAG 
GACGAGGTCA AGGCCGCGAT CGCCGAGGCC GTGAAGGCGG GTCCGCTGCG CGTGGCCGTC 
AACTGCGCAG GCGTCGGCTG GGCGCAGCGC ATCCTGTCCA AGAAGGGCGT CCACCCGCTC 
GACCTGTTCC AGACGGTGAT CAACATCAAC CTGGTCGGCA CGTTCAACGT GATGCGCCTG 
GCCGCCGAAC AGATGAGCCA GCAGGAAACC GCCGACGCGC AGGGCTCGCG CGGGCTCGTC 
GTGAACACCG CCTCCGTGGC GGCGTTCGAG GGCCAGATCG GCCAGATCGC CTACACGGCC 
TCGAAGGGCG GCGTGCACGC CATGACGATC ACCGCGGCGC GCGACCTGGC GCAGTTCGGC 
ATCCGCGTGA ACACGATCGC ACCGGGCACC ATCAACACCC CGATGCTGGC CGGCGTCACC 
GACGAGTTCA AGAAGACGCT GGAGGCGGGG ATCCCGTTCC CGCAGCGCCT GGGCGAGCCC 
GCCGAGTACG CGCAGCTGGC GTACTTCCTC GCGGAGCACG ACTACATCAA CGGCGAGACC 
ATCCGCATGG ACGGCGCTCT CCGGATGGCT CCGCGCTAA 

 

Protein sequence

MDVSGSSVIV TGGASGLGAA TAKRFAEAGA TVFGLDLQPS IDKAAPVDNV HLIATDVTKE 
DEVKAAIAEA VKAGPLRVAV NCAGVGWAQR ILSKKGVHPL DLFQTVININ LVGTFNVMRL 
AAEQMSQQET ADAQGSRGLV VNTASVAAFE GQIGQIAYTA SKGGVHAMTI TAARDLAQFG 
IRVNTIAPGT INTPMLAGVT DEFKKTLEAG IPFPQRLGEP AEYAQLAYFL AEHDYINGET 
IRMDGALRMA PR