Gene Tpau_0118 details

Gene Information

• Locus tag: Tpau_0118
• ID: 9154252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 126666
• End bp: 127361
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 71%
• Product: hypothetical protein
• Protein accession: YP_003645111
• Protein GI: 296137868

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.309719
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTTTGT TCGGCAAGAA GCAGAAGTCC TCGCGCGCGG AGCGTCGGGC GCAGGCCAAG 
GCGCTCAAGT CGAAGGCGCG GCTCGAGGCG AAGCTGGCCG CGAAGAACAC GGCGAAGAGC 
GCCAAGCGCT CCGCGAAGAA CGCCGTGAAG TCCGAGCGCG GCGCGCAGAA GTCGGATGTG 
GCGCGGGCGA AAGTGATCGC GCGGATGCAG GGCAAGTCCG ACAAGCTCAA CCTCAAGATC 
GCCGAGACGA ACGCCCGCGC GGCGGTCGAC GGCAAGCTGC TGTCGGAGGC GCGACTGAAG 
CGTTACGTCT CGACCGCACG CCTGCTGGCG CCCGTCGTGG TGCCGCTCGC CTACCGGGCC 
GCGCAGGCCG GGCGCAACAA GCTCGACTCG GCGCGGGCCA CCCGGCTTGG CGTCCCGGTC 
GACGAGGTCG CGCAGTTCGC CGGTTTCGGC GGCGGCTTGG CCGCCCGGGT GGCGGCATCA 
CGCCGGTCCC TGGACCAGCT CGCGACCGCA CATCCGGACG CCGAGACCAA GGCCTTCGTC 
GCGGCCGTCG CACAGCGCCT CGACGATCTG TCGGCGGCGA TCACCGCGTC CGAGTCCATG 
CCGCCCGCCC GGCGCCGGCC GGCGCATCAG GCGATCGCGC GCGAGCTCGA CGGCATCGAC 
GCCGATCTGC TCAACCGTCT CGGCGTCAGC TCCTAG 

 

Protein sequence

MGLFGKKQKS SRAERRAQAK ALKSKARLEA KLAAKNTAKS AKRSAKNAVK SERGAQKSDV 
ARAKVIARMQ GKSDKLNLKI AETNARAAVD GKLLSEARLK RYVSTARLLA PVVVPLAYRA 
AQAGRNKLDS ARATRLGVPV DEVAQFAGFG GGLAARVAAS RRSLDQLATA HPDAETKAFV 
AAVAQRLDDL SAAITASESM PPARRRPAHQ AIARELDGID ADLLNRLGVS S