| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0098 |
|---|
| Symbol | |
|---|
| ID | 9154232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 104035 |
|---|
| End bp | 105387 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003645091 |
|---|
| Protein GI | 296137848 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGGA GCCTGCGGGC GCGGCTGCTG GTGATCATCG TGCTGGTCAC CTCGTTCACG
GCTGCGGTGA CCGGGGCCTC GGTGGCCTAC GTCGTGCGCG ACTGGGTCTA CGAAGACGCG
CAACAGGCCG TGCTGACCGC GTTCCGACAC GATATGGAAC GGTTCGACGA TCAGCCGACG
ATGGAGAACC TCCTCGGCGA CTATCTGGTG ACGACCTCCG ACGGAGGGGT GGTGCAGCCG
GGGACGGTGC CGCCCGGCAC CGTGCCGTCC TCGATGTCGG CGGATCTGCG GGCGACGCCC
AGCATCTACC GATTCCAGCG ACTCGCCGAC GGCCGCCTGC TGGTCGGGCA CAGTTCCAGC
AAACATCCGT ATCTGATCTA TTCGGTGCAG CCCTTGGAGG GCGTGCAGCA ACGGCTGCGG
CAGCTGATGA CCTTCGTCGC GCTCGCCACC CTGGGCGGGG CACTGCTCGG CGGACTAGCG
GGGGTGCTGG TGGCGCGCGC CGTGACCCGG CCCCTGCGGC GGGTCCAGGA TGTGGCGTCC
GCCGTGGCGG CGGGCGACTC CACCGCGCGG CTCCCCGAGA CCTCGCTGGC CGAATTGCGC
GAGCTCTCGG TGAATTTCAA CGGCATGCTC GACCGGCAGA ACGAATCCCT CGATGTGCTG
CGCCGCCAGG ACGAGCGCTC CCGGCGGTTC GCCAGTGACG TCTCGCACGA GCTCCGCAGT
CCGCTGGCCG CGCTGGTGCC GGCCGCCGAG GTCCTGCGGG AGGAAGCGGA TGCGATGGCC
GCCGAGTCGT CGGGTCATCC GGATCTGGCG CGCGCGGCGC GCATGGTGGC CTCCGAGGTC
GACGGCCTGG CCCAGCTACT CGACGATCTG CTCGAGATCA CTCGCCTCGA CGCGGGTGTG
GCGCAGGTGC GGGCCGAAGA ATTCGACCTG GTCGCCACGG TGCGGGAGGC GCTGGACGCA
CGCGGATGGT CGGGCGTGCG GATCGACGGG CCGGGCGAGC TGTGGGTGAA CGCGGACCGG
CGCCGAGTGG TGGCCGTGGT GACGAATCTG GTGGGGAACG CTCTGCGCCA CGGCGCGCCT
CCGGTGACGG TGTCGATGCA CCGCTGGGCG CAGCAGGGTG ATGGCGGAGC CGTGGTCGAG
GTGCGCGACC ACGGTGGCGG AGTGCCCGAG GGGCACGAGG ACCTGATCTT CGACCGCTTG
CACAAGGCGC AGGCGGCGCG CTCGCGCGGC GCAGGCGGCG GTGCGGGCCT GGGCCTGGCG
ATCGCCCGGG ATAACGCCAG GCTGCTCGGC GGCGATGTCG ACTACCGGCG CGACGGCGCC
ACCACCGTCT TCCGGGCCTG GTTCCGCGGC TAA
|
|---|
| Protein sequence | MAGSLRARLL VIIVLVTSFT AAVTGASVAY VVRDWVYEDA QQAVLTAFRH DMERFDDQPT
MENLLGDYLV TTSDGGVVQP GTVPPGTVPS SMSADLRATP SIYRFQRLAD GRLLVGHSSS
KHPYLIYSVQ PLEGVQQRLR QLMTFVALAT LGGALLGGLA GVLVARAVTR PLRRVQDVAS
AVAAGDSTAR LPETSLAELR ELSVNFNGML DRQNESLDVL RRQDERSRRF ASDVSHELRS
PLAALVPAAE VLREEADAMA AESSGHPDLA RAARMVASEV DGLAQLLDDL LEITRLDAGV
AQVRAEEFDL VATVREALDA RGWSGVRIDG PGELWVNADR RRVVAVVTNL VGNALRHGAP
PVTVSMHRWA QQGDGGAVVE VRDHGGGVPE GHEDLIFDRL HKAQAARSRG AGGGAGLGLA
IARDNARLLG GDVDYRRDGA TTVFRAWFRG
|
|---|
| |