Gene Tpau_0097 details

Gene Information

• Locus tag: Tpau_0097
• ID: 9154231
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 103328
• End bp: 104035
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 70%
• Product: two component transcriptional regulator, winged helix family
• Protein accession: YP_003645090
• Protein GI: 296137847

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCGCAC TGCTGCTCAT CGAGGATGAT CCTGCGATCG TCGACGCCCT GACCCTGTCG 
TTGCAGCGGC TGGACTATCA GGTGGCGCAC CTGCCGAGTG CGCCGGACGA TCTCGACGAC 
CACGTCAGCG CGGCCGATGC GGTGATCCTG GACGTGGGCT TGCCCGGCGA GGACGGATTC 
GCGGTGTGTC GCCGGATCCG CCGCACCAGT CAGGTGCCCA TCCTCATGCT CACCGCGCGG 
GCGGACGATA TCGACACCGT CGCGGGATTG GAGTCCGGGG CCGACGATTA CGTCGTCAAG 
CCGGTGAGCC CGCGCGTCCT CGATGCCCGG ATCAAGGCCG CACTGCGGCG ATCCGCGCCC 
GCCGGTGCCG CACCCGAGAC GGTGGTGGCC GAGCCGGCCG TGCCGGCGGT GGCCGTACCC 
GGGACCGGTC TGGTCGTGGA CCGAGCCGCG GCGGAGGTGC TGCGCGACGG GGCGCCGCTG 
CCACTGACGC CCACGGAGAA GCGCCTGATG TACGTCTTCG CCGATCACCC CGGTCAGGTG 
CTCAGCCGCG AGCAGTTGCT GACACTGGTG TGGAACCAGG ACTTCCTCGG GGATTCGCGA 
CTGGTCGACA ATGCGATCCT GCGGCTGCGG CCCAAGGTCG ATCCGCCCGG TGAGCCCAGC 
TGCATCGAGA CGGTCCGCGG CTTCGGCTAC CGGTTCCGGG CGGGCTGA 

 

Protein sequence

MVALLLIEDD PAIVDALTLS LQRLDYQVAH LPSAPDDLDD HVSAADAVIL DVGLPGEDGF 
AVCRRIRRTS QVPILMLTAR ADDIDTVAGL ESGADDYVVK PVSPRVLDAR IKAALRRSAP 
AGAAPETVVA EPAVPAVAVP GTGLVVDRAA AEVLRDGAPL PLTPTEKRLM YVFADHPGQV 
LSREQLLTLV WNQDFLGDSR LVDNAILRLR PKVDPPGEPS CIETVRGFGY RFRAG