Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0081 |
Symbol | |
ID | 9154215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 87293 |
End bp | 89548 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_003645074 |
Protein GI | 296137831 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.768822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGATC TCCAATCGGC CGCGCCTCCC GCTTCCGCGG ACGAGTCCGC GGACGCCACG GCTGAGGCGC AGCGCACCTT CCTCGATGTC GGCGGCATGA CCTGCGCGGC GTGCGTGGGC CGGGTGGAGC GCAAGCTCAA CAAGCTCGAC GGGGTGCGGG CGGTAGTGAA TCTGGCCACC CGCACCGCAA CGGTCGAACA TGCGCCGACG GTCACCGTCG AGCAGCTGAC CGGCACCGTC GAGGCGGCGG GGTACACCGC GGCACCGAAG TCCCCGAACC CGCGCCGCGC AATGCTGGCG GAGGAGCGCG AGCGGCGCGA CGTGCTGCGC CGCCTCGTCG TCTCACTGGT GCTGTTCGTG CCGGCCGCCG ATCTGTCGAT CGTGCTCGCC ATCATCCCGT CGACCCGGTT CCCCGGCTGG CAGTGGGTGC TGCTCGCACT GAGCCTGCCC GTGGTCACGT GGGGCGCCTG GCCGCTGCAC AAGAAGGCCT GGCAGGGCGC GCGGCACGGT GCGGCGACGA TGGACACCCT GGTCTCGGTG GGCATCATCT CCGCTACCGC GTGGTCGGTG GTCACCGTGC TCACACCCGG CCGGCAGCGG CCCGACCCGC ACGGTCTGTG GAACGCGATC GTGCAATCCG ACCCGATCTA CCTCGAGGTC GCGATGGGCG TCACGGTGTT CGTACTCGCC GGCCGGTACT TCGAGGCCTC CGCACGCGCC AAGGCGGCTT CGGCGCTGCG CGACCTCTCG ACCCGCGGCG CCCGCGACGT GTCCGTGCTG GTGCGCGACG GTTCCGAGCT GCGGATCCCG ATCGGCGAGC TGCGCGAGGA CCAGGTGTTC GTGGTTCGGC CCGGCGAGAC GATCGCCACG GACGGCGTGG TGGAGTCCGG CAGCGCGTTC GTCGACAATT CGGCGATGAC GGGCGAGTCC CGCCCGGTCC CGGCCGGACC GGGCGACCGA GTGGTGGGCG GCACCGTGTG CCAGGACGGC CGACTGACGG TGCGCGCCAT CGCCGTCGGC GAGGACACCA CGTTCGCGGC GATGCTGCGT CTGGTGGAGG ACGCGCAGGC CACGAAGGCG CGGATGCAGC GCCTGGCCGA TCGCGTCTCG GCGGTGTTCG TGCCGTGCGT GTTCGCCATC GCCGCCCTGA CTTTCGCGGG CTGGATGCTG TTCGGCGGGT CGATCGACGA TGCCGTGAAG GCCGCGATCG CCGTGCTGGT GATCGCCTGT CCGTGCGCCC TGGGCCTCGC GACCCCGGTG GCGTTCATGG TGGCCTCGGG CCGGGGTGCG CAGCTCGGCG TGTACGTACG CGGCCATCAG GCATTGGAGG CCACCGAGAG CATCGACACG GTGGTCTTCG ATAAGACCGG CACGGTGACC ACGGGCCTGC TGGAAGTGGC GGCGATCGCC GTGGCGGACG GATTCACCGA GGCCCAGGTG CTGCGCCTCG CAGGTGCTGT CGAGACCGCC TCCGAGCACG CCGTCGCGCG GGCGGTCGTG GCGCGGGCGG GCGCCGATCT GCCTGCGGTG GAGGATTTCC GGGCCGTACC CGGCCTCGGC GCCACGGGTA CGGTGGACGG GCGGACGGTG CGGGTGGGCA ATCCGCGGTT CGTCTCGCCC GGTGTGCTGG CGCCCGCGGT CGATGCGGCG GCCGAGGCGG GTCGCACCGT GGCCGTGGTG GAGGTCGACG GGGCTGTGGC CGCCGTCATG GAGATAGCCG ACACGATCAA ACCCGATGCG CGGGCGGCGA TCACGCGGCT GCACGAGGCC GGCATCACCA CCGTCCTCCT CACCGGCGAC AATGCCGCCG CGGCCGCGAA AGTGGCTGCG GCCGTGGGCA TCGACGACAT CCGTTCGGAT GTGCTGCCCG AGGGGAAGGT GGCAGAGATC CGGGCGCTGC AGGCCGAGGG CCGCCGGGTT GCCATGGTGG GCGACGGCGT GAACGACGGT CCCGCGCTGG CCGCAGCAGA TCTCGGGTTG GCAATGGGTA CCGGTACCGA CGTGGCCCAA GGTGCCGCCG ATGTGGTGCT GATGCGCGAG GAGCTGTCCG CCGTTCCCGA TGCGCTCGGC CTGGCCCGCG CCACACTGAA GACGATCAAG ACGAACCTGG TGTGGGCCTT CGGCTACAAC GTCGCGGCGA TTCCGATCGC GGCCGCCGGA CTACTGAATC CCCTCATCAG CGCCGCGGCG ATGAGCTTCA GCTCCTTCTT CGTGGTGTGG AACAGCCTGC GCCTACGTCG ATTCGGCTCC CGCTAG
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Protein sequence | MTDLQSAAPP ASADESADAT AEAQRTFLDV GGMTCAACVG RVERKLNKLD GVRAVVNLAT RTATVEHAPT VTVEQLTGTV EAAGYTAAPK SPNPRRAMLA EERERRDVLR RLVVSLVLFV PAADLSIVLA IIPSTRFPGW QWVLLALSLP VVTWGAWPLH KKAWQGARHG AATMDTLVSV GIISATAWSV VTVLTPGRQR PDPHGLWNAI VQSDPIYLEV AMGVTVFVLA GRYFEASARA KAASALRDLS TRGARDVSVL VRDGSELRIP IGELREDQVF VVRPGETIAT DGVVESGSAF VDNSAMTGES RPVPAGPGDR VVGGTVCQDG RLTVRAIAVG EDTTFAAMLR LVEDAQATKA RMQRLADRVS AVFVPCVFAI AALTFAGWML FGGSIDDAVK AAIAVLVIAC PCALGLATPV AFMVASGRGA QLGVYVRGHQ ALEATESIDT VVFDKTGTVT TGLLEVAAIA VADGFTEAQV LRLAGAVETA SEHAVARAVV ARAGADLPAV EDFRAVPGLG ATGTVDGRTV RVGNPRFVSP GVLAPAVDAA AEAGRTVAVV EVDGAVAAVM EIADTIKPDA RAAITRLHEA GITTVLLTGD NAAAAAKVAA AVGIDDIRSD VLPEGKVAEI RALQAEGRRV AMVGDGVNDG PALAAADLGL AMGTGTDVAQ GAADVVLMRE ELSAVPDALG LARATLKTIK TNLVWAFGYN VAAIPIAAAG LLNPLISAAA MSFSSFFVVW NSLRLRRFGS R
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