Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0070 |
Symbol | |
ID | 9154204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 72325 |
End bp | 73341 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003645063 |
Protein GI | 296137820 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.214439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGTTC TGGTTACCGG CCACCAGGGG TATCTGGGCA CGGTCATGGT GCCTCTGCTG CAGGCGGAGG GTCACGATGT GGTGGGCCTC GATTCCGGCC TGTTCGCCGA CTGCACGCTG GGTGCGACGC CGCCGGAGCC GCCGGACATC GCCGTCGACC TGCGTGACGT GACCGAGGAG CAGCTCGCCG GTTTCGACGC CGTGATCCAC CTCGCCGCGC TGTCGAACGA TCCGCTCGGA GCCCTCGATC CGCAGATCAC CTATGACATC AACCACCATG CGTCGTCGCG GCTGGCCCGC CTGGCAAAGC AGGCCGGTGT CGCGCGATTC CTCTATGCCT CCACGTGTTC GGTATACGGC GCCGCGGGCG ACGGTCTGGT CGACGAAGAT GCTCCGCTCC GTCCGCTCAC CCCGTACGCC GAGAGCAAGG TGCGGGTCGA GGACGATGCT GCGGCGATCG CCGACTCCGG ATTCGCGCCC GTCTTCCTGC GCAACGCCAC CGCCTTCGGA TTCTCCCCGC GGCTGCGCGC GGACATCGTG CTCAACAACC TGGTCGGCTA CGCCACCCTC ACCGGCGAGG TGAAGGTGCT CTCCGACGGC ACCCCGTGGC GACCACTGGT GCACGCCCAG GACATCGCAC GCGCGTTCGC CACCTGTCTG ACCGCGCCGG TGGAGAAGAT CTCGTGCCAG GCGTACAACA TCGGCACCGA GGTCAACAAC GTCACGGTCG CCGAGATCGC GCAGTCGGTG ATCGACGCCG TGCCCGGGTC CACGCTCAAC ATCACCGGCG AGTCCGGGGC CGATCCGCGT TCGTACCGGG TCGACTTCTC CCGTGCCCGA GACGGACTCG GTTTCGAAGC GCAGTGGACC GTGGCCGATG GTGCGGCAGA ACTGTACCGC GAGTACACGG CCCGGGGGCT GACCTCGGAG GCCTTCTTCG AGCGCTACAC CCGTCTCGCG CACCTCAAGT CGCGCCAGGA GGCCGGTACG CTCGACGACA CGATGCGCCC GGTCTAG
|
Protein sequence | MKVLVTGHQG YLGTVMVPLL QAEGHDVVGL DSGLFADCTL GATPPEPPDI AVDLRDVTEE QLAGFDAVIH LAALSNDPLG ALDPQITYDI NHHASSRLAR LAKQAGVARF LYASTCSVYG AAGDGLVDED APLRPLTPYA ESKVRVEDDA AAIADSGFAP VFLRNATAFG FSPRLRADIV LNNLVGYATL TGEVKVLSDG TPWRPLVHAQ DIARAFATCL TAPVEKISCQ AYNIGTEVNN VTVAEIAQSV IDAVPGSTLN ITGESGADPR SYRVDFSRAR DGLGFEAQWT VADGAAELYR EYTARGLTSE AFFERYTRLA HLKSRQEAGT LDDTMRPV
|
| |