Gene Tpau_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0057 
Symbol 
ID9154191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp57964 
End bp58539 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content69% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003645050 
Protein GI296137807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.19755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATGC GGGCACGAGG GTTGACGGTT CCGGGTGCGT TCGAGTTCAC GCCGCAGCAG 
TTCGGAGACG ACCGGGGCCG GTTCCTGGAG TGGTTCAAGG CCTCTGAGTT CGAAGAGGCC 
ACCGGTGCGC CCATGCCGGA GCTGCAGCAG GCGAACTGCT CGGTCTCGGC CGCGGGAGTA 
CTGCGCGGCG TGCACTACAC GCTCACCCCG CCGGGGCAGG CGAAGTACGT GACCTGCGTG 
CGCGGCGCCT TCCTCGACGT CGTGGTGGAC CTGCGCCGCG ATTCCCCGAC CTTCGGTACC 
TGGGACACGG TATTGCTCGA CGATGTGGAC CGCCGCGCCG TGTACCTGCC CGCCGGCCTG 
GGCCACGCGA TCCTGTCGCT GGAGGACCGA TCGACGGTGA TGTACCTGTG CTCGGTGGAG 
TACGCACCGG ACGTGGATCG TGAACTCGAC GCCTTCGACC CCGATCTCGC GATCGACTGG 
CCCACCGAGG GGCGCGACGG GACACCGCTC ACCTACGTCC GATCGGCGAA GGACGAGGCG 
GCACCCTCGC TGCGCGAGGT GTTCGGGGGG CGATGA
 
Protein sequence
MAMRARGLTV PGAFEFTPQQ FGDDRGRFLE WFKASEFEEA TGAPMPELQQ ANCSVSAAGV 
LRGVHYTLTP PGQAKYVTCV RGAFLDVVVD LRRDSPTFGT WDTVLLDDVD RRAVYLPAGL 
GHAILSLEDR STVMYLCSVE YAPDVDRELD AFDPDLAIDW PTEGRDGTPL TYVRSAKDEA 
APSLREVFGG R