Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0042 |
Symbol | |
ID | 9154176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 44811 |
End bp | 45920 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003645035 |
Protein GI | 296137792 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGTACCG CGGTCGCTGC GACCGTCGGT GCGGCGTGGG CGGTATCCGG GACCGCACTC ATCGCCGTGC TCATTGCGAT CGCAGCCGGC GGTGCCACCT ACGCACTCAC CGCACCGTCA CCGGCGCCCG CTGCCGCGCC GGCTACCACC ACGGGGACGA GCAACGACGA GAACGTCCGG GTGGCGCTCA AGGCGGCCGA TGATTCGCGC ACCATCTTCG GGCTGCTGTC CAACGCGGTC ACCTCGTCGT CGTCCGGTCT GTCGGCCGCG ATGTCCGGGG TTCCACAGAT CTTCGACAGC GTCGACACGG CCCGGGCGGG CGCCGAGCAG GTGGCCGCGG GGCTGGAGGA AACGGCCACC ACCCAGAATG CACTCAATGA GGTCTCGCAA TCGGCCGGCG CCTGGGCGAA CACCCTCGAC CAAGTCGAGG GCATCTCGGG ACTGTCGGTC GCGGTGCGCT CCAGCTCAGT CCAACTGCGC AAACAACTGA TCGACAATCC GACTCCCGGG TCCGAAGACA CGGTGGCGCA GCTCGATCAG GTGCTCGCGG CCACCGATGG CTTGAAGACC TTGGAATCCG TCGACCAGCT CAAGGGATCG CTACGCTCGC TGACGTCGCT CTCGGACCGG TCCGCGACGG CACTGGAATC GGCGCGCAGC TCGGCGCGGC AGCTCCGCGA CGGCCTCACC ACCATCTCGC GAGCCCGGCC GAACGCCGAA TCGGCGGTGG GCAACCTGTC CACCGGTATG AAGCAGCTCG GCATCGCGCT CAAATCCATC GACGATCAGC TCGCGCTCAT CCAGACCCGG CTTCGCGACG AGACGCGCGA TCAGGTGGAG CCGGTGGCCG CAGCGGCACC GGCGATGGAC GGTTCCGCGC GTATCGGCTG GGCGCTGTTC GCCGCCGGTA TCGCGGGTGT TCTCGCCTAT CTCCTCGCGC TGGTCGTCCA TCAGCGGGTG CGCCGGGTTC CGGCCGCCCA GTCCCCGGCG CCGTTGGCCG ACCTGGCCCG CGCCATCAGC GAGATCCCCA CGCCCTCACA CGGATTCCCG CGGCCGGACA CCCACAACAC CGATCCGTGG TTGCCGGTGC AGTTCGCCCG CGAGAAGTAG
|
Protein sequence | MRTAVAATVG AAWAVSGTAL IAVLIAIAAG GATYALTAPS PAPAAAPATT TGTSNDENVR VALKAADDSR TIFGLLSNAV TSSSSGLSAA MSGVPQIFDS VDTARAGAEQ VAAGLEETAT TQNALNEVSQ SAGAWANTLD QVEGISGLSV AVRSSSVQLR KQLIDNPTPG SEDTVAQLDQ VLAATDGLKT LESVDQLKGS LRSLTSLSDR SATALESARS SARQLRDGLT TISRARPNAE SAVGNLSTGM KQLGIALKSI DDQLALIQTR LRDETRDQVE PVAAAAPAMD GSARIGWALF AAGIAGVLAY LLALVVHQRV RRVPAAQSPA PLADLARAIS EIPTPSHGFP RPDTHNTDPW LPVQFAREK
|
| |