Gene Tpau_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0040 
Symbol 
ID9154174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp42899 
End bp43486 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003645033 
Protein GI296137790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACGA CGACGGGCCG ACCAGGCCGG CCGCCTCGGC TGAACCGGGA CAAGATCGTC 
GCGACGGCGA TCGAGATCGT GACGCGCGAG GGATACACCA AGCTCTCCAT GCGGCGCCTC 
GCCGACCGAC TGGGCACCAG CCCCATGGGG ATCTACTACT ACTTCGAATC GAAGAACGAG 
CTGCTCGGCT TCATCGCCAG CGAGCACGAC AGCGTGGCGG CCTACCTGCA GGGGGCACCG 
TCGAACGATC CCTACGAGCG CACCGTGCAG ACCTCCGAGG CGATGGTCCG GTTCCTCTGC 
GCCCACGCCT GGGCGCTGTC GGGCATCCTC GACGGCCACA TCCGGGTCGA AGAGTTCATG 
GCGAACCACC TGGACGGTCT GGCCCGCAGT ATCGGCGAGC TCGGTTTCGA CGAGGAAGGG 
ACGGCGGAGA CCGTGCGCTG GATCTGGCGG ATCGTCGTCG GCGAGGCCAT GACCCGGTCT 
CGGGCTGCCC CGACCGGCGG GCTCACGGAC ACGATCGAGA GCTATCTCGC CGGCAGGCTC 
GTCCGTGTGC GGCCGCGGCG CGTGGGTCGG GAGATCGGGT CGGAGTAG
 
Protein sequence
METTTGRPGR PPRLNRDKIV ATAIEIVTRE GYTKLSMRRL ADRLGTSPMG IYYYFESKNE 
LLGFIASEHD SVAAYLQGAP SNDPYERTVQ TSEAMVRFLC AHAWALSGIL DGHIRVEEFM 
ANHLDGLARS IGELGFDEEG TAETVRWIWR IVVGEAMTRS RAAPTGGLTD TIESYLAGRL 
VRVRPRRVGR EIGSE