| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0029 |
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| Symbol | |
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| ID | 9154162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 29957 |
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| End bp | 31471 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | penicillin-binding protein transpeptidase |
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| Protein accession | YP_003645022 |
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| Protein GI | 296137779 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.851817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAC CGATCCGCCG CGTCTCCGTC GTCGTGGTCC TGCTCGTGGT CGCGCTCCTC
GCGAACGCCA CCTATGTGCA GGTCTTCAAG GCCGACGAGC TCCGTTCCGA CCCGCGCAAC
GAGCGGGTCC TGCTCGACGA GTACTCGCGC CAGCGGGGCT CGATCCTCGC GGGCGGCCAG
GTGATGGCCC AGTCGGTGCC CACCGACGAC CGGTACAAGT ACCTGCGCAC CTACCCGAAG
GACCTCGCGC CGGCGTACGC CCCCGTCACC GGCTATTACT CCATGGTCTA CAGCGCCGGT
GCGCTAGAGC ACGCCGAGGG ATCGATCCTC AACGGCAGCG ACGACCGCCT GTTCGGCCGG
CGCATCGTCG ACACCCTGTC CGGTCGCGAT CCGCGCGGCG GCAACGTGGT CACCACGATC
AACCCGGTGA TGCAGCGCAT CGCCTACGAG CGCTTGATCT CGGCGTGCGG CGCCAAGGGG
CCCTGCCACG GCTCCGTGGT GGCGATGGAA CCGCAGACCG GGAAGATCCT CGCGATGGTC
TCGACCCCGA GCTACGACCC CAACCCGCTG TCCTCCCACG ATCCGAGCGT GGTCAGCGCG
GCCTGGCAGA ACCTCACCAA GGATCCCGAT CAGCCCATGT TGAACCGGGC CACATCGCAG
CTGTACCCGC CCGGCTCGAC CTTCAAGGTG ATCACCACCG CGGCGGCGTT GAGCCAGGGC
CGCGGGATCG ATCTGAACAC CCGCCTGACC GCCGACAAGC AGATCACCCT CCCGGGCGGC
GGTGGCACCA CTCTGCAGAA CTACGCAGGG ATGACGTGCC CGGATTCGTC GGGCGGTACC
GTCAGCCTGT TGCAGGCGTT CCAGTACTCG TGCAACACCG CGTTCGTGGA CCTGTCCACC
CAGAAGATGC AGGACGGAGG AGAGGCGATC AAGCAGATGG CGAACAACTT CGGCGTGAAC
AGCTCGCCCG AACCCATCCC GCTGCCCGTG TCGCAGTCGG TGACCGGCCC GCTGTCCTAC
CCCGCGCAGG TGGGGCAGTC GGCGATCGGT CAGCTCGACG TGGCGCTGAC CCCGCTGCAG
AACGCGGTGA TCGCGGCGAC CCTGGCCAAC GGCGGTATCC GGATGCAGCC GTACCTGGTG
GACAGCCTGC AGTCGCCCGA CCTCTCCACG ATCGCGACCA CCTCCCCGAA GCGGCAGGGA
CAGGCGCTGA GCCCGGAGGT CGCGGCGCAG ATGCGGGAGC TGATGGTCGC CTCGGAGCGC
AACACCAAGG GCTCGGGAGG CAGCGTCTCG ATCGCGTCGA AGACGGGCAC CGCGGAGCAC
TCCGAGGGCC AGAAGGGCGG CGAGGCGCCG CACGCCTGGT ACATCGGGTA CGGCCCGGTC
AACGACCCGA AGGTCGCGGT GTCGGTCATC ATTGAGAACG GTGGAAATCA GGGCGAGCAG
GCGACCGGTG GGTCGCTCGC GGCGCCCATT GGACGTGCGG TGATAGGCGC CGCGGTGAAC
GGGCAGGGGA ACTGA
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| Protein sequence | MNTPIRRVSV VVVLLVVALL ANATYVQVFK ADELRSDPRN ERVLLDEYSR QRGSILAGGQ
VMAQSVPTDD RYKYLRTYPK DLAPAYAPVT GYYSMVYSAG ALEHAEGSIL NGSDDRLFGR
RIVDTLSGRD PRGGNVVTTI NPVMQRIAYE RLISACGAKG PCHGSVVAME PQTGKILAMV
STPSYDPNPL SSHDPSVVSA AWQNLTKDPD QPMLNRATSQ LYPPGSTFKV ITTAAALSQG
RGIDLNTRLT ADKQITLPGG GGTTLQNYAG MTCPDSSGGT VSLLQAFQYS CNTAFVDLST
QKMQDGGEAI KQMANNFGVN SSPEPIPLPV SQSVTGPLSY PAQVGQSAIG QLDVALTPLQ
NAVIAATLAN GGIRMQPYLV DSLQSPDLST IATTSPKRQG QALSPEVAAQ MRELMVASER
NTKGSGGSVS IASKTGTAEH SEGQKGGEAP HAWYIGYGPV NDPKVAVSVI IENGGNQGEQ
ATGGSLAAPI GRAVIGAAVN GQGN
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