Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0015 |
Symbol | |
ID | 9154148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 17428 |
End bp | 18780 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | protein of unknown function DUF21 |
Protein accession | YP_003645008 |
Protein GI | 296137765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.309554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTAGCCG TCCTGAGCAT CCTCGCGGGC ATCGTGGTGG TGCTGCTCAT CACCGCCTTC ACCGGCTACT TCGTAGCCCA GGAATTCGCA TACATGGCCG TCGACCGGTC GCGCCTGAAG GCGCGGGCCG AAACCGGCGA TCCCGCAGCG AACCGCGCTC TGTCCGTCAC CAAGCGGACC TCGTTCATGC TCTCCGGGGC CCAGCTCGGC ATCACCGTCA CCGGCCTCCT GGTCGGCTAC GTGGCCGAAC CCCTCATCGG TCAAGGCCTG GGCACACTGC TCGGCGGTGT GGGCGTGCCG TCCGCCGTGG GCATCGCGAT CGGCGCGATT GCCGCGGTGG GCCTGTCGAC CGTCGCGCAA ATGGTGTTCG GAGAACTGTT CCCGAAGAAT CTCGCCATCT CTCGGCCGGA ACCCGTTGCG CTCCAGCTAT CCCTGTCGAC CACGATCTAC CTGAAGGTGT TCGGCTGGCT CATCCGCTTC TTCGACGCCG CCTCCAACGT ACTGCTGCGC GCGGTGCGGA TCGAACCCGT GCACGATGTG GAGCACTCGG CCACCCCGCG CGACCTCGAA CACATCGTGG CCGCCTCCCG TGATGCCGGT GAACTCCCAG CCGAACTGTC CACACTGCTC GACAGGATTC TCGATTTCCC CACGCACACA GCCGAACATG CCATGATCCC GCGCTCGCGG GTCGACGTGG TCCCTGCCGG TGAACCCGCG GGAGCCGTCC TCGATCGCAT GGCGGACGGA CACACCCGGT ACCCGGTGGT CGGTGCGACG TCCGACGACC TGATCGGTGT GATCACCCTG CACGACCTGC TCACCGACAC TTCAGGCACC GCGGCCACTC GCTGCCGGCC GGCGGTGGTG GTCCCCGCCT CCCTGCCGTT ACCCGCCGTG GTGGCCCAGC TCGCCGACGC GCGGCAGGAG ATGGCGCTGG TGATCGACGA GTACGGCGGT TTCGACGGTG TGGTGACCGT CGAGGACATC GCCGAGGAGC TGGTCGGTGA GATCGACGAC GAACACGATC CCGGAGCCGC TGATCCGGCG GTTCCGGAGG GCGAAGGCTG GCTGGTGCGC GGAGACCTGC ACATTGATGA GCTCGAACGC CTTCTCGACC TCGACCTCGA ACCCGGAGAT TACGAGACGA TCGGCGGCGC GGTGATCACC CGCCTCGCCG CCCTCCCGCG ACCGGGCGAC ACCGTCGACC TGCCGGTCGT ACCCGAACCG CCCAACCTAC TCGACGACGC ACCGCCGCAA CGATTCCTGC GAGCAGAGGT ACGCACCGTC GAGCGGCGCG TACCGGACCG CGTGCACCTG ACCGTGCGAA CCGAGGAGGC CGGCGATGGA TAA
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Protein sequence | MLAVLSILAG IVVVLLITAF TGYFVAQEFA YMAVDRSRLK ARAETGDPAA NRALSVTKRT SFMLSGAQLG ITVTGLLVGY VAEPLIGQGL GTLLGGVGVP SAVGIAIGAI AAVGLSTVAQ MVFGELFPKN LAISRPEPVA LQLSLSTTIY LKVFGWLIRF FDAASNVLLR AVRIEPVHDV EHSATPRDLE HIVAASRDAG ELPAELSTLL DRILDFPTHT AEHAMIPRSR VDVVPAGEPA GAVLDRMADG HTRYPVVGAT SDDLIGVITL HDLLTDTSGT AATRCRPAVV VPASLPLPAV VAQLADARQE MALVIDEYGG FDGVVTVEDI AEELVGEIDD EHDPGAADPA VPEGEGWLVR GDLHIDELER LLDLDLEPGD YETIGGAVIT RLAALPRPGD TVDLPVVPEP PNLLDDAPPQ RFLRAEVRTV ERRVPDRVHL TVRTEEAGDG
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