| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0007 |
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| Symbol | |
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| ID | 9154138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 7677 |
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| End bp | 9272 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003645000 |
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| Protein GI | 296137757 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCAT CGTCCGGTGC GCTGAGCGCG CCGAAGCGGT GGATCTCACT GGCCACCGTG
TGTATCGCGG TCCTGATGAC CGGTATGGAC AACAGCATCG TCACCATCGC GCTGCCCACC
CTCAGCAATG AGTTCGGCGG CGGCATGAGC GCCCTGCAGT GGATCGTGGA TTCGTACACG
CTGGTGTTCG CGGGCCTGCT GCTGGCCACG GGCTACTTCG GGGACCGGAT CGGCCGGCGC
AAGGTGCTGG TCGCCGGACT GGTGTGCTTC ATCGTGATCT CGGTCCTGGC GACCCGGTCC
ACATCGCTGG CGCAGTTGAT CACCGCGCGT GCGGCATTGG GCGCCGCCGC GGCGCTGATC
TTCCCCGCGA CCCTGGCGAT CATCTCCGTG CTGTTCCCGG AGAAGCAGGA GCGGACGAAG
GCGATCGCCG TGTGGTCGGC CGCGGCCGGC GCGTCGATCG CGATCGGTCC CGTGGTCGGC
GGCTATCTGG TCGAGCACTT CGCCTGGTCC TCGGTGTTCT GGATCAATGT GCCGATCTCG
GTGATCGCGA TCATCGGATG TCTGACGTTG GTGCCCGAGT CGTTCGGTTC CGAACGCCCG
TCCTTCGATC TGTTCGGGGT GCTGCTGTCG ATCTCGGGTA TCACCCTGCT CGTGTGGGCC
CTCATCGAGG CGCCGAACTT CGGATGGGGA AGCGCTCCCG TGGTCGGCGC GCTCGTGGCG
GCGGCGGTCT TCCTCGTCAC TTTCGTGGTC TACGAGCGGC GACAGGCGAA TCCGGTCCTC
GATGTGACCC TGTTCCGTTC GCGCGGGTTC GCGATGGGCT CCTTCGCGAT CTGCGCCGGC
TTCTTCTGCC TCCTGGGGTT CGTGTTCATC ACGATCATGT ACTTCCAGGC GGTGCTGGGA
TACGGACCGT TGGAGACCGC GGTCCGGGTG ATCCCGTTCG CGCTGGTGGC GGTCGCGGTG
ACGCCGCTGG CGGCGCTGGC CAACACCGAG CGCCGGATGC GGTTCGCCAT TTCGACCGGC
CTGGCCATCA TGGCGGCGGG TTTCGTCTTC ACGTCGCGAC TGACCGAATC CGCCGACTAC
CTGACACAGA TCCTGCCGTC GATGTCGGTG ATCGCCGTGG GTCTCGGGTT GCTACAGGGG
CCCGCCACCA CATCGGTGAT GACCTCGGTG CCATCGGGTG AGGCCGGGGC GGGATCGGCC
GTGAACGACA CCACCCGGGA GGTCGGCGGT GCGCTGGGCG TCGCGATCCT GGGTTCGGTT
GTCGCGCATC TCTATTCCGC TCGGGTGGCC GAGGACGTCG CCCGGCTGCC GGTGGCACCG
GGAATCCGAG CCGAGGCCGA ATCGTCCGTC ATCGGGGGCG TGCGCGCCAT CGGTGCGGCA
CCGCCCGAGC TGCAGGCCGC GCTCGGACAC ACGGTGCAGC AGGCCTTCGT CTCCGCGATG
CAGTCGGCGA ACCTGGTCGC GGCCGGTGTC GGCGCGGTCG CATGCGTCGT GGTCGCGGTC
TTCCTGCGGA CCCGGCCCGA GGCGCGGCAC CGTCGTTCGA CGTCGCAGAC GCAGGTCAGC
GTTCACGACC TGGTGGGCAG GCGCGCCGGC GAGTGA
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| Protein sequence | MSASSGALSA PKRWISLATV CIAVLMTGMD NSIVTIALPT LSNEFGGGMS ALQWIVDSYT
LVFAGLLLAT GYFGDRIGRR KVLVAGLVCF IVISVLATRS TSLAQLITAR AALGAAAALI
FPATLAIISV LFPEKQERTK AIAVWSAAAG ASIAIGPVVG GYLVEHFAWS SVFWINVPIS
VIAIIGCLTL VPESFGSERP SFDLFGVLLS ISGITLLVWA LIEAPNFGWG SAPVVGALVA
AAVFLVTFVV YERRQANPVL DVTLFRSRGF AMGSFAICAG FFCLLGFVFI TIMYFQAVLG
YGPLETAVRV IPFALVAVAV TPLAALANTE RRMRFAISTG LAIMAAGFVF TSRLTESADY
LTQILPSMSV IAVGLGLLQG PATTSVMTSV PSGEAGAGSA VNDTTREVGG ALGVAILGSV
VAHLYSARVA EDVARLPVAP GIRAEAESSV IGGVRAIGAA PPELQAALGH TVQQAFVSAM
QSANLVAAGV GAVACVVVAV FLRTRPEARH RRSTSQTQVS VHDLVGRRAG E
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