Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0004 |
Symbol | |
ID | 9154135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 4169 |
End bp | 5053 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | 6-phosphogluconate dehydrogenase, decarboxylating |
Protein accession | YP_003644997 |
Protein GI | 296137754 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGTTGG GTCTCATCGG TCTGGGCAAG ATGGGCGCGA ACATGCGCCA GCGCGTGCGC GCCGGCGGGC ACGAGGTAGT CGGTTACGAC CCTCGGCCCG AAGTGACCGA CGTGCCGACC CTCGAAGCAC TCGTCGAGGC GCTTGAAGCA CCCCGGGTCG TCTGGGTGAT GGTGCCCGCC GGTGAGCCCA CCCGGGAGAC GGTGCGCAAG CTGGCCGACC TGCTCGGCGA AGGCGATCTG GTGATCGACG GCGGTAATTC CAAGTACACC GACGATCAGC CCAATGCCGA CCTCTTGGCG GAGAAGGGCG TCGGGTACCT CGATTGTGGT GTCTCCGGCG GTGTCTGGGG TCTGGAGAAC GGTTACGGCC TGATGGTCGG CGGTTCCGAC GCCGATGTCG AACGGGCCAT GCCGATCTTC GATGCGCTGC GCCCCGAGGG CGATCGCGCC GACGGTTTCG CGCACAGCGG TCCGGTGGGC GCCGGCCACT ACGCCAAGAT GATCCACAAC GGCATCGAGT ACGGACTGAT GCAGGCGTAC GGCGAGGGCT ACGACCTACT CGAGGCGGAA CCGCTCATCG AGAACGTGGC CGGTACCCTC CGAGCCTGGA GCAAGGGTAC CGTCGTACGC TCATGGCTCC TCGACCTCCT GGTCAAGGCC CTCGAAGAGG ATCCTGGCTT ACAGGAGATC ACCGGGTACA CCGAGGATTC CGGCGAGGGC CGGTGGACCG TCGAGGAGGC GATCCGGCAC TCCGTGCCGG CGCCCGTGAT CGCGGCGGCG CTGTTCGCCC GGTTCCAGTC CCGGCAGGAC GATTCCGACA CCATGAAGGC GGTCTCCGCC CTGCGCAATC AGTTCGGCGG GCACGCCGTC CGGCGCGCCG ACTAG
|
Protein sequence | MQLGLIGLGK MGANMRQRVR AGGHEVVGYD PRPEVTDVPT LEALVEALEA PRVVWVMVPA GEPTRETVRK LADLLGEGDL VIDGGNSKYT DDQPNADLLA EKGVGYLDCG VSGGVWGLEN GYGLMVGGSD ADVERAMPIF DALRPEGDRA DGFAHSGPVG AGHYAKMIHN GIEYGLMQAY GEGYDLLEAE PLIENVAGTL RAWSKGTVVR SWLLDLLVKA LEEDPGLQEI TGYTEDSGEG RWTVEEAIRH SVPAPVIAAA LFARFQSRQD DSDTMKAVSA LRNQFGGHAV RRAD
|
| |