| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0003 |
|---|
| Symbol | |
|---|
| ID | 9154134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2938 |
|---|
| End bp | 4128 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_003644996 |
|---|
| Protein GI | 296137753 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTAC CGAAAGGCTC CGTCGGCATG AAGTTTCGCG TCCCGCACGA GGAGTTCGCC
GAATCCGTCG CGTGGGTAGC CCGCAGTCTG CCGTCGCGTC CTCCGGTACC GGTCCTCGGC
GGTGTCCTGC TGACCGCGGG TGACGACGGG CTCACCGTCT CCGGATTCGA CTACGAGGTT
TCGGCACAGG TTCGGGTCGG CGCCGAGGTC GCCGACGAGG GCCAGGTCCT GGTGTCCGGG
CGCCTGCTCG CCGACATCAC CAAGGCGTTG CCCAACAAGC CGGTCGATGT GGAGCTGGAC
GTGACCCGGG TCGCGATCAG TTGTGGCAGT GCGAAGTTCT CGCTGCCCAC GATGCCGGTC
GAGGATTACC CGCAGCTGCC CGAGCTGCCG CAGCAGACCG GTGCGATCGA GCGCAGCATG
TTCGCCGAGG CGATCTCCCA GGTGGCCATC GCGGCCGGTA AGGACGACAC CCTGCCGATG
CTCACCGGTA TCCGGGTCGA GATCGAAGGT CAGCGTGTCG TTCTCGCGGC CACCGACCGG
TTCCGCCTGG CCGTGCGCGA ATTCGACTGG CAGCCGCAGT CCGGCGACGT CAAGGCCGCC
GTCCTGGTGC CCGCGAAGAC GCTGTCCGAG GCCGCGAAGA CCTTCGCCGG TGATTCCGAG
GTAGGAATCG CCCTGGGCGC GGGTTCCGCG GTGGGTGCCG ATGGCCTGCT CGGTGTGGTC
GGGCCGGATC GCCGCACCAC CACCCGCCTC CTCGACGCCG ACTTCCCGAA ATTCCGCCAG
CTGTTGCCCG CTTCGCACAC CGCGATCGCC ACGATGGAGA TCGCGCCGCT GCTCGAGGCG
ATCAAGCGCG TGGCCCTGGT GGCCGACCGC GGCGCCCAGG TGCGCATGGA GTTCGGTGAC
GGCACGTTGC GGCTCTCGGC CGGCGGAGAC GACGCGGGGA AGGCTGAGGA GGAGCTCCCC
GCCGATTTCC AGGGCGAGCC GCTCACCATC GCCTTCAACC CGGGCTACCT GCAGGACGGC
CTCGCTGCCA TCCACACGGA TTCGGTGACG TTCGGTTTCA CCACACCGTC TCGGCCTGCG
GTGCTGCGGC CCACGGTGGA GAATGCTTTC CAGCCGGACG ACTCGGGGGC CTTCCCCGCG
CCGCAGAGCG CGTACACGTA CCTGCTGATG CCCGTGCGTC TGCCCGGCTG A
|
|---|
| Protein sequence | MSLPKGSVGM KFRVPHEEFA ESVAWVARSL PSRPPVPVLG GVLLTAGDDG LTVSGFDYEV
SAQVRVGAEV ADEGQVLVSG RLLADITKAL PNKPVDVELD VTRVAISCGS AKFSLPTMPV
EDYPQLPELP QQTGAIERSM FAEAISQVAI AAGKDDTLPM LTGIRVEIEG QRVVLAATDR
FRLAVREFDW QPQSGDVKAA VLVPAKTLSE AAKTFAGDSE VGIALGAGSA VGADGLLGVV
GPDRRTTTRL LDADFPKFRQ LLPASHTAIA TMEIAPLLEA IKRVALVADR GAQVRMEFGD
GTLRLSAGGD DAGKAEEELP ADFQGEPLTI AFNPGYLQDG LAAIHTDSVT FGFTTPSRPA
VLRPTVENAF QPDDSGAFPA PQSAYTYLLM PVRLPG
|
|---|
| |