Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0001 |
Symbol | |
ID | 9158432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 190 |
End bp | 1662 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | chromosomal replication initiator protein DnaA |
Protein accession | YP_003644994 |
Protein GI | 296137751 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.428353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTTG ATCCACTCAT CGAGACGTGG ACAGCCGTCG TCGACGATCT CTGTGGGGAG AGCACCGATC GCACCCTCAC GATGCAGGAG AAGGCCTGGC TGCGCCTGGT CCAACCGCTG ACACTCACCG AGGGTTTCGC CCTGGTCGCA GTGCCCTCGC AGTTGATGAA AGACGTCATC GATCGAAGCC TTCGCGACCC GATCATCGAC GCCCTGTCCA TGCGCCTGGG CCAGGACGTG GAGCTCGGTG TCCGGATCTC CCCGGATGCC ACGCCGCCGG TGACGGTCGC CGCCGAGCCG GATCCACCGG CCGGCCCGAG CACCGCGGAC CTTCCCGTAC CGAACCTCCC CCCGGCTGCG GCGCCGTTGG AGGCACCGTC GGTCACGCTG CCCCCGCCGA TGACCGGACC ATCGTCGAAA TCGAACGGCA GCTCCGGGTC GAGCGGCTCG AGCCTGAACC AGAAGTACAC CTTCGAGACC TTCGTGATCG GCGCCTCGAA CCGGTTCGCC CACGCCGCCG CCTTCGCCGT GGCCGAGGCG CCCGCCCGGG CGTACAACCC GCTCTTCATC TGGGGCGAGT CCGGGCTCGG TAAGACGCAT CTGCTGCACG CCGCCGGCCA CTACGCACAG CGACTGTTCC CCGGCATGCG GGTGAAGTAC GTCTCCACCG AGGAGTTCAC GAACGACTTC ATCAACTCGC TCAAGGACGA CCGTCAGGTG CAGTTCAAAC AGCGCTACCG CGATGTGGAC ATCCTGCTGG TGGACGACAT CCAGTTCCTC GAAGGCAAAC TGGGTATCCA GGAGGAGTTC TTCCACACCT TCAACACGCT GCACAATGCC AACAAGCAGA TCGTGGTCTC GTCCGATCGT CCGCCGAAGC AGCTTGCGAC GCTGGAAGAT CGGCTGCGCA CCAGGTTCGA GTGGGGCCTG ATCACCGATG TCCAGCCGCC CGAGTTGGAG ATCCGGATGG CGATCCTGCT CAAGAAGGCG CAGATGGAGC GGATTCACGT TCCGCACGAT GTGCTGGAGC TGATCGCCAC CCGGATCGAC CGGAACATCC GCGAGCTGGA GGGCGCCCTG ATCCGCGTGA CCGCCTTCGC CTCGCTCACC CAGACCGACG TGACCTACGA ACTCGCCGAA ATGGTGCTCC GCGATCTCGT TCCGGACACC ACCACCATCG AGATCTCTTC CAGCACCATT CTTTCCGTGG TGGCGGAGTA CTTCGAGATC ACGGTCGCCG ATCTCAAGGG CACCGAGCGC GCCCGTGCTG TGACCCATGC CCGCCAGATC GCCATGTACC TGTGCCGCGA GCTCACCGAG CTCTCCCTGC CGAAGATCGG CCAGATCTTC GACCGCGACC ACACCACGGT CATGTACGCG GAGCGCAAGA TCCGCAAGGA GATGCCCGAG CGGCGCCGCG TCTACGACCA GGTGCAGGAA CTGACCACCC GGATCAAACG ACGCAGCCAA TAG
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Protein sequence | MTVDPLIETW TAVVDDLCGE STDRTLTMQE KAWLRLVQPL TLTEGFALVA VPSQLMKDVI DRSLRDPIID ALSMRLGQDV ELGVRISPDA TPPVTVAAEP DPPAGPSTAD LPVPNLPPAA APLEAPSVTL PPPMTGPSSK SNGSSGSSGS SLNQKYTFET FVIGASNRFA HAAAFAVAEA PARAYNPLFI WGESGLGKTH LLHAAGHYAQ RLFPGMRVKY VSTEEFTNDF INSLKDDRQV QFKQRYRDVD ILLVDDIQFL EGKLGIQEEF FHTFNTLHNA NKQIVVSSDR PPKQLATLED RLRTRFEWGL ITDVQPPELE IRMAILLKKA QMERIHVPHD VLELIATRID RNIRELEGAL IRVTAFASLT QTDVTYELAE MVLRDLVPDT TTIEISSSTI LSVVAEYFEI TVADLKGTER ARAVTHARQI AMYLCRELTE LSLPKIGQIF DRDHTTVMYA ERKIRKEMPE RRRVYDQVQE LTTRIKRRSQ
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