Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_3361 |
Symbol | |
ID | 9147277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 3735164 |
End bp | 3736639 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | alpha amylase catalytic region |
Protein accession | YP_003638439 |
Protein GI | 296131189 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00605646 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCCACG GCCCGCAGCT CATCACCTAC GCCGACCGCC TCGCCGGGGA CCTGCCCGGC CTGCGCGCGC TCCTCGACGG GCCGCTTGCC GGCGCGTTCG GCGGCGTGCA CGTGCTGCCG TTCTACCCGC CGTTCGACGG CGCCGACGCC GGGTTCGACC CGCGCGACCA CACCCAGGTC GACCCCCGCC TGGGCACGTG GGACGACGTC CGCGCGCTCG GCGCCGGCCG TGAGGTGATG GCCGACGTCA TCGTCAACCA CGTCTCTGCG GACTCCGCGC AGTTCCGCGA CGTGCGCGAG CGCGGCGACG CCTCCCCGCA CGCGCCGATG TTCCTCACGC TCGGTGCCGT GTTCCCCGAC GGCGCGTCGG AGGAGGACCT CGCGCGCATC TACCGCCCGC GCCCGGGCCT GCCGTTCACC GTGATGACCC TCGGCGGTCG CAGGCGTCTG GTGTGGACGA CGTTCACGCC CGACCAGGTC GACCTCGACC TGCGGACCCC GCAGGCGTGG GAGTACCTGA CGGCCGTCGT CGACGCGCTC ACCGCGGGCG GTGTGACCAT GCTGCGGCTC GACGCCGTCG GGTACACCGG CAAGGAGGCG GGCACCGACT GCTTCATGAC GCCCGCGACC GACGCGTACA CCGAGCGGAT CGTGTCGCTG GCACGCGCGC GCGGCGCGCA GGTGCTCGTC GAGGTGCACG GGCACCACAC GCAGCAGATC GAGATCGCCC GCAAGGTCGA CCTCGTCTAC GACTTCGCGC TGCCGCCGCT CGTGCTGCAC GCGCTCACCG CGGCCGACCT CGAGCCGCTC GCCGGGTGGC TGGCGATCCG GCCGGCCAAC GCCGTGACCG TGCTCGACAC GCACGACGGC ATCGGCATCG TCGACGTGGG CCCGTCCGAC CTGCGCCCCG GCGAGCCCGG CCTGCTGGCG CCGGAGAAGA TCGACGCGCT CGTCGAGACG ATGCACGAGA ACTCCGGCGG CACGTCGCGC CAGGCCACCG GCGCGGCCGC GTCGAACCTC GACCTCTACC AGGTCAACTG CACGTTCTAC GACGCGCTCG CGCGCGACGA CCGCCGCTAC CTGCTCGCGC GGCTGCTGCA GCTCTTCGTC CCCGGGATCC CGCAGGTCTA CTACGTGGGC CTGCTCGCGG GGTCCAACGA CATGGAGCTG CTGGCCGCCA CGGGTGTGGG ACGCGACGTC AACCGGCACC ACTACACGGA CGGCGAGGTG GCCGACGCCC TGGCGCGGCC CGTGGTGCGG GCGCAGCTCG CGGCACTGCG GCTGCGGGCG TCGCACGCGG CGTTCGGCGG CGCGTTCGAG TGGGACCTCG ACGGCACGCG CGGCTGTCTC GCGTGGACGG CGGGCGACGA GCGCGCGGTC CTGACGTTCG ACGTGGCCGA CGCGTCGTTC ACGGTGCACG CGACGGGCCC GGACGGCGAG GAGGCGGTCC TCACCGACGC GGCCGTCGCA CCCTGA
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Protein sequence | MTHGPQLITY ADRLAGDLPG LRALLDGPLA GAFGGVHVLP FYPPFDGADA GFDPRDHTQV DPRLGTWDDV RALGAGREVM ADVIVNHVSA DSAQFRDVRE RGDASPHAPM FLTLGAVFPD GASEEDLARI YRPRPGLPFT VMTLGGRRRL VWTTFTPDQV DLDLRTPQAW EYLTAVVDAL TAGGVTMLRL DAVGYTGKEA GTDCFMTPAT DAYTERIVSL ARARGAQVLV EVHGHHTQQI EIARKVDLVY DFALPPLVLH ALTAADLEPL AGWLAIRPAN AVTVLDTHDG IGIVDVGPSD LRPGEPGLLA PEKIDALVET MHENSGGTSR QATGAAASNL DLYQVNCTFY DALARDDRRY LLARLLQLFV PGIPQVYYVG LLAGSNDMEL LAATGVGRDV NRHHYTDGEV ADALARPVVR AQLAALRLRA SHAAFGGAFE WDLDGTRGCL AWTAGDERAV LTFDVADASF TVHATGPDGE EAVLTDAAVA P
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