| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2422 |
|---|
| Symbol | |
|---|
| ID | 9146325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 2712347 |
|---|
| End bp | 2715085 |
|---|
| Gene Length | 2739 bp |
|---|
| Protein Length | 912 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_003637511 |
|---|
| Protein GI | 296130261 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.372219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0041258 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCA CGGCGCACGA CCCGGCGCGA CGCAGCGCCG CCGCGGACCA CCTGGCCGAC
CTCGGCGAGT ACCGCCCGTA CGCCGAGGAC GCGCGCGAGG TCCTCGACCG TCTCGCCACG
AGCTCCGCCG GGCTGACGTC CGGCGAGGCG GCCGTGCGTC TCGACACCGT CGGCCCGAAC
CGCCTGCCGA CCGCCGGCCG GCCGCCCGCC CTCGTACGCT TCCTCGGCCA CTTCGACGAC
GTGCTGATCT ACATCCTGCT GGCCGCCGCC GTGCTGAAGG CGTTCCTGGG CGACTGGGTC
GACTTCACCG TGATCCTCGT CGTCGCGCTG GTCAACGCGC TCGTCGGGTT CCTGCAGGAG
GGGCAGGCCG AGCGTGCGCT CGACGGCATC CGCACGATGC TGTCCCTGAC CGCGACCGTG
CGCCGCGACG GGAGCTGGAC CGAGGTGGAC GCGGCCACGC TCGTGCCCGG CGACGTCGTC
CGTGTCCGGT CGGGCGACAA GGTCCCTGCC GACGCGCGGC TCGTCGAGGC CACGGGCCTG
CAGGTCGACG AGTCGGCGCT GACCGGCGAG TCGGTGCCCG CGGCCAAGCA CGTCGAGGCG
GTGGGCACCG ACGCCGGGGT CGGCGACCGC GCGAGCATGC TGTTCTCCGG CACGATCGTG
GCCGCCGGCA CCGCGCTGGC CGTGGTCACC GCGACCGGCG GGCGCACGGA GATCGGCCGG
ATCCAGTCGC TCATCGCCGA CGTCGACCAC CTCGAGACGC CGCTGAAGCG CCAGCTCGGT
CGCCTCGGGA CGCTGCTGTC GCGCGGCATC CTCGTCATGG CGTTCGCGAT GCTCGTGATC
GGGCGCGTCA TCCACGACTT CGCACTGCCG GACCTCGTGT CCGCCGCGAT CGGGTTCGCG
GTGGCGGCCG TGCCGGAGGG GTTGCCGGCG CTCGTGACGA TCACCCTCGC GCTCGGCGTG
CAGCAGATGG CGCGGCAGCA CGCCATCACG CGCAAGCTGC CCGCGGTCGA GGCGCTCGGC
TCCGTGACGA CCATCTGCTC GGACAAGACC GGCACGCTCA CGCGCAACGA GATGACCGCC
CGCACGGTCG TCACGGCCGA GCACGTGTAC GACGTCGAGG TCCTGGGCTA CGAGCCCGTC
GGTGGCGTCA CGCTCGACGG CCGGACGACC GGCCCGGGCG AGCACCCCGA CCTGCACGCG
CTCGTGCGCG CGAGCGTGCT GTGCAACGAC GCGCGCGTCG CGCCGGACGA CGCGGGGCGC
TGGGGCGTCG TCGGGCAGCC CACCGAGGGG GCGCTGCGGA CGCTGGCCCT CACGACCGGC
GTCGCGACCG ACGGCGCGCA GCGCGTGGCC GCCGTGCCGT TCGAGTCGGT CAACAAGCTC
TCGGCGACGC TCGACCGGCT GCCCGACGGG CTGCACGTGC ACGTCGTCGG CGCGCCGGAC
CGGCTGCTGG ACCGTGCGGT GGCGCAGCGC GGCGCCGACG GCACACCCGT GGCGCTGCGG
CGCGCGTCCT GGGAGTCGGT GGTCGACGAG CTCGGCGGGC AGGGGCTGCG CGTGCTGGCC
GCGGCCGAGC GCCCGGCGGC CGGGGGCACG TCGGGCCTCA CCCTGGACGA CGCCACCGGC
CTGACGTTCC TCGGGGTGGT CGGCATCGTC GACCCACCGC GCCCCGAGGC CGTCGCCGCG
ATCGCCGACT GCCACCGTGC GGGCATCGCC GTGAAGATGA TCACCGGCGA CCACGCCGGC
ACGGCCGTCG CGATCGCGCG CGAGCTCGGC GTCGTGCGTC CCGGCGAGGA CGTGCAGGCG
CTCACGGGCC CCGAGCTGGA GGCGATGACG GCCGAGCAGC TACGCGCCCG CGTCCGCGAC
GTCGACGTCT ACGCGCGCAC GAGCCCCGAG CACAAGATCC GCATCGTCCG CGCGCTGCAG
TCGCACCGCG AGGTCGTCGC GATGACGGGG GACGGCGTCA ACGACGCCCC GGCGCTCACG
CGCGCGGACG TCGGCATCGC GATGGGCATC AAGGGCACCG AGGCGACCAA GGAGGCCGCG
GAGATCGTCC TGGCCGACGA CAACTTCGCG ACGATCGAGC GGGCCGTCGA GGAGGGACGG
CGGATCTACG ACAACATCCG CAAGTCGGTG GTGTTCCTGC TGCCGACCAA CGGCGCGCAG
TCCCTCGTCA TCCTCGTCGC GGTGCTGCTC GGGCTCACGC TGCCGCTGAC GCCCGTGCAG
ATCCTGTGGG TCAACCTCGT CACCGCCGTC ACGCTGTCGC TGGCCCTGGC GTACGAGCCC
GCCGAGCCCG GCATCATGGA CCGCCCGCCG CGCTCACCGC GCGAGCCCGT GCTGTCCCGC
CCGTCCCTGC TCGTCGTCGT GTGGGCCTCG CTGCTCATCG GCGGCGCGAC GCTCGGCGTG
TACCTCGTCG AGAAGCAGCT CGGCGCCGGC GACGGGCTCG CCCAGACGTC GGCCGTGACG
ATGCTGGCCC TGGGCCAGAC GGCGTTCCTG TTCTCGTGCC GGTTCCTGGG TGGCTCGTCG
CTCACCCCGC GCGTGCTCAC CGGCAACCGC GTGGTGTGGA TCGCGATCGG CACGCTCATG
GTGCTGCAGC TCGTGTTCAC CTACGCGCCG TTCATGCACG CCTGGTTCGA CTCCGCGCCG
ATCGGGCCGC GCGACTGGGG GCTGACGCTC GCGGTCGCCG TCGTGGTGTT CCTGCTCTGC
GAGGCGGGCA AGGCGGTCGC GCGGCGCGTG CGGGCATGA
|
|---|
| Protein sequence | MTSTAHDPAR RSAAADHLAD LGEYRPYAED AREVLDRLAT SSAGLTSGEA AVRLDTVGPN
RLPTAGRPPA LVRFLGHFDD VLIYILLAAA VLKAFLGDWV DFTVILVVAL VNALVGFLQE
GQAERALDGI RTMLSLTATV RRDGSWTEVD AATLVPGDVV RVRSGDKVPA DARLVEATGL
QVDESALTGE SVPAAKHVEA VGTDAGVGDR ASMLFSGTIV AAGTALAVVT ATGGRTEIGR
IQSLIADVDH LETPLKRQLG RLGTLLSRGI LVMAFAMLVI GRVIHDFALP DLVSAAIGFA
VAAVPEGLPA LVTITLALGV QQMARQHAIT RKLPAVEALG SVTTICSDKT GTLTRNEMTA
RTVVTAEHVY DVEVLGYEPV GGVTLDGRTT GPGEHPDLHA LVRASVLCND ARVAPDDAGR
WGVVGQPTEG ALRTLALTTG VATDGAQRVA AVPFESVNKL SATLDRLPDG LHVHVVGAPD
RLLDRAVAQR GADGTPVALR RASWESVVDE LGGQGLRVLA AAERPAAGGT SGLTLDDATG
LTFLGVVGIV DPPRPEAVAA IADCHRAGIA VKMITGDHAG TAVAIARELG VVRPGEDVQA
LTGPELEAMT AEQLRARVRD VDVYARTSPE HKIRIVRALQ SHREVVAMTG DGVNDAPALT
RADVGIAMGI KGTEATKEAA EIVLADDNFA TIERAVEEGR RIYDNIRKSV VFLLPTNGAQ
SLVILVAVLL GLTLPLTPVQ ILWVNLVTAV TLSLALAYEP AEPGIMDRPP RSPREPVLSR
PSLLVVVWAS LLIGGATLGV YLVEKQLGAG DGLAQTSAVT MLALGQTAFL FSCRFLGGSS
LTPRVLTGNR VVWIAIGTLM VLQLVFTYAP FMHAWFDSAP IGPRDWGLTL AVAVVVFLLC
EAGKAVARRV RA
|
|---|
| |