Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_2287 |
Symbol | |
ID | 9146188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 2558112 |
End bp | 2559791 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding protein CydD |
Protein accession | YP_003637377 |
Protein GI | 296130127 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.598211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000674989 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAAGCCTC TCGACCCTCG GCTGCTGCGC CACGCGCGCT CGGCCCGCGG CTACCTCGCG CTGACCGTGG GGCTCGGGCT GGCGACGGGT GCGCTCGTGG TGGCGCAGGC GCTGCTCCTC GCGCACGCGC TCGGCTCGGC GGTCGCTGAG GGGGCCACCC TCGCGGACGT CACGCCGCTC GTCGCCGCGC TCGTCGGCGT CGTCCTGCTG CGGGTGCTCG CCACCGGCGT CCAGGAGAGG TACGCCCACC GCGCCGCGAC CCGCGCGGTC GCCGAGCTCC GCGAGCGTGT CGTCGCGCAC GCCGCGGCCG TCGGCCCGCG CCGCGCCGCG CCCGCGGACG GGGCGGGGCT CGTCACGCTC GCGACCCGCG GCCTCGACGC CCTCGAGCCG TACTTCGTGC GCTACCTGCC GCAGCTCGTG CTCGCCGCGA CCCTCACGCC CGCGACGCTG CTCGTCGTCC TCGGGCTCGA CGGGGTGTCC GCCGCGATCA TCGCCGGCAC GGTGCCGCTC GTGCCGTTGT TCATGTGGCT CGTCGGGGTC ATGACGCAGG GACGCTCCGA GCGGGGACTG GCGACGATGC AGCGGCTGGG CGCCCAGGTG CTCGACCTGC TGGCCGGTCT GGGCACGCTG CGGGCGTTCG GGCGGGAGCG GGGTCCGGTC GCGCGGGTCC GCGAGCTCGG CGACGCGCAC CGACGCGCGA CGATGGGAAC GCTGCGGGTC GCCTTCCTCT CCGGCATGGT GCTCGAGCTG CTCACCACGC TGTGCGTCGC GCTCGTCGCG GTGGGGATCG GCCTGCGGCT CGTCTACGGG AACGTCGACC TCGTGACCGG TCTCGCGGTC CTGGTGCTCG CGCCGGAGGT GTTCGCACCA CTGCGGCAGG TGGGCGCCCA CTTCCACGCG TCGACCGACG GCGTCGCAGC AGCGGACCGC GCGTTCGCCG TGCTCGAGGT GCCGGTCCCG GAGCCCGGCC GGGCACCCGC CCCGGACCTC GCCGCAGGGC GCGTGCGCGC CCGCGGCGTC GCGGTGCGCG CGCGGGGAGG ATGGGCCCCC GCGCCTGTCG ACGTCGAGCT CGCTCCCGGA CGCGTCGTCG CGCTCGTCGG CCCGTCCGGG GCGGGCAAGT CGACGACGGT CGAGGTGCTG CTCGGCCTGC TGGCACCCGA CGCCGGGCAC GTCGAGCTCG TCGCCGCCGA CGGGACCCCG ACCGACCTGC GGGACGTCGA CGTGCACGAC TACTGGCGCC AGGTGACCTG GCTCCCCCAG CGCCCTGTGC TCGAGCCCGG CACCGTGCAC GAGCTCCTCG GCTCCCCCCC GCCCGCGGAG CGCGACCGCG CCGCCGCGCT CACGGGCCTC GACACCGTCG TCGCCGTGCT GCCCGACGGC TGGTCCACCG TGCTCGGCGG CGGCGGCGCG GGCCTCAGCG TCGGCCAGCG GCAGCGGCTC GCACTGACCC GCACCCTGCT GCGCCCCAGC CCGGTCGTCG TGCTCGACGA GCCGACCGCG CACCTCGACG CCGCCGGCGA GCAGGTCGTG CTCGCGACGC TGGACGCGCT GCGCGACGCG GGCAGCGCCG TGCTGCTCGT CGCGCACCGT GCATCGCTCA CCGAGCGCGC CGACGACGTC GTGCACGTCA CGACCGCGGC GGACGATGCG GTCGTCGCCG ACGCCGGGGT CGCCCGGTGA
|
Protein sequence | MKPLDPRLLR HARSARGYLA LTVGLGLATG ALVVAQALLL AHALGSAVAE GATLADVTPL VAALVGVVLL RVLATGVQER YAHRAATRAV AELRERVVAH AAAVGPRRAA PADGAGLVTL ATRGLDALEP YFVRYLPQLV LAATLTPATL LVVLGLDGVS AAIIAGTVPL VPLFMWLVGV MTQGRSERGL ATMQRLGAQV LDLLAGLGTL RAFGRERGPV ARVRELGDAH RRATMGTLRV AFLSGMVLEL LTTLCVALVA VGIGLRLVYG NVDLVTGLAV LVLAPEVFAP LRQVGAHFHA STDGVAAADR AFAVLEVPVP EPGRAPAPDL AAGRVRARGV AVRARGGWAP APVDVELAPG RVVALVGPSG AGKSTTVEVL LGLLAPDAGH VELVAADGTP TDLRDVDVHD YWRQVTWLPQ RPVLEPGTVH ELLGSPPPAE RDRAAALTGL DTVVAVLPDG WSTVLGGGGA GLSVGQRQRL ALTRTLLRPS PVVVLDEPTA HLDAAGEQVV LATLDALRDA GSAVLLVAHR ASLTERADDV VHVTTAADDA VVADAGVAR
|
| |