Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_2224 |
Symbol | |
ID | 9146124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 2482007 |
End bp | 2483218 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | helix-turn-helix domain protein |
Protein accession | YP_003637314 |
Protein GI | 296130064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.163485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00213028 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGACTA TCGGTGACCG CGTGCGCGAG GCGCGGTTGG CCGCTGGGCT CTCCCAGACG GCCCTGGCGG GGAACGCCTT CTCGCCCAGC TACATCTCCC TCATCGAGGC GGGGCACCGT GAACCCACGG ACGCGGCGCT CGGTGTGCTG GCCGAACGGC TCGGCACGAC CCTCGAGTTC CTCAAGCACG GCGAGGACGG GCCCAACGAG GCCCGGACCC GGCTCGAGCT CGACTACGCA CGTCTCGATC TCGCGAGCGG CGACGCCGCC GGCGCCGCGC ACCGCATCAC CGCGCTCGAC CTGTCGGTCG TCACCCCGGT GCTGCGGGTC GAGGCGCTGA CGACCCTGGC GCGCGCGCAC GAGCTGCTCG GCGAGCTCGA GACGGCGATC ACGCTGCTGG AGCCGCTGCT CACGGAGACG CAGGCGCGCC CCGACCACCT GCGGGCCGCC GTGCTCACGA CGGCGCTCGT CGGGTGCTAC CTGGAGGCGG GTGACCTGCA CCGTGCGGTG GAGGTCGGCG AGCGCACGCT GGCGGACCTC GACGGGGCGG ACCTGGTGGG GACCGACGAG CACCTGCGCC TGGCGTCCAC GGTGCTGTGG GCGTACGTCG AGCGCGGCGA CCTGCTGTAC GCGACGCACC GGGCCGCCGA GCTGGTCCGG CTCGCGGAGT CGCTCGGCAC GCCGCGCGGC CGCGGCAGCG TGTACTGGAA CGCGGCCCTC GTCGCGGAGC AGCGGCGGGA CTACGAGCTG GCGCAGCGCT ACACCGAGCG CGCGCTGGCT CTGCTCTCCG AGGGTGAGCC CGACCGCGAC CTGCCGCGCC TGCGCGTCAA CTACGCGTGG CTGCTGCTGC GGTCCGAGCC GGCCGATCCG CGCGCCGCGC TCGCGCAGAT CGACAAGGCG GAGCCCGGGT TGAACGCCGT CGGGTCGGCG CTCGACGTCG CCCGCCTGCA GGTCGAGCGT TCGCGGGCGC ACCTCATGCT CGGTGACGAG GCCGCCGCCG AGGCCGACGC GCGCGCGGCT GGGGGAGGCG CCTCGTCTCG AGGCGGCGAC CGCGCACATC GCCCTGGGCG ACGTGCTCGA CGCGCGCGGC GACCACGACG GCGCCGCGAA GGCGTTCCAG TGGGGTGCGG ACATGCTCGG CATGATGGCG GCGACGCGGC ACTCGGCCGG CGTGTGGCGC GACCTCGGGG ACAGGTACCT GCGTCGCGGT GA
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Protein sequence | MTTIGDRVRE ARLAAGLSQT ALAGNAFSPS YISLIEAGHR EPTDAALGVL AERLGTTLEF LKHGEDGPNE ARTRLELDYA RLDLASGDAA GAAHRITALD LSVVTPVLRV EALTTLARAH ELLGELETAI TLLEPLLTET QARPDHLRAA VLTTALVGCY LEAGDLHRAV EVGERTLADL DGADLVGTDE HLRLASTVLW AYVERGDLLY ATHRAAELVR LAESLGTPRG RGSVYWNAAL VAEQRRDYEL AQRYTERALA LLSEGEPDRD LPRLRVNYAW LLLRSEPADP RAALAQIDKA EPGLNAVGSA LDVARLQVER SRAHLMLGDE AAAEADARAA GGGASSRGGD RAHRPGRRAR RARRPRRRRE GVPVGCGHAR HDGGDAALGR RVARPRGQVP ASR
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