| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2049 |
|---|
| Symbol | |
|---|
| ID | 9145945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 2286576 |
|---|
| End bp | 2288567 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003637143 |
|---|
| Protein GI | 296129893 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.146206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCA CGACGAGGAC CGACCGTCCC GCCGGCCCGC CGCCCGGCGG GCCGCGTGGC
GGGCCCATGG GCATGGGTCT GGGGATGCCC GGTCAGAAGT CGATGGACTT CCGTGGCTCG
TTGCGGCGCC TGCTCACGGT GCTGGCGCCC GAGCGTGTCC GGCTCGTCGC CGTACTCGTG
CTGGGGGCGT TGTCGGTGGC GGCGGCGGTT GCCGGCCCCA AGCTGCTGGG CAACGCGACC
GACGTGCTGT TCGACGGTGT GGTCTCGCGG CAGCTCGCGC AGCTCCTGCC GGCCGGCAGC
ACGCAGCAGG AGGCGGTCGA CGCGCTGCGC GCCGCGGGGC AGGGCACGGT GGCAGACATG
GTCGCGGGCA TGCCCGGCCT GACCGTCGGC GACGGCGTCG ACTTCGAGCG GCTCGGCTCG
ATCCTGCTGC TGGTGCTCGG CGTGTACGTC GCCGCGTTCG TGTTCGGCTG GCTGCAAGGG
CGGCTGACGG CGCGCGCGGT GCAGAACACG GTCCTGCGCA TGCGGACGCA GGTCGAGGAG
AAGCTCACGC GCGTCCCGCT GTCGTACTTC GACAAGCAGC CGCGCGGTGA GCTGTTGTCG
CGTGTCACCA ACGACATCGA CAACGTCGCG CAGACCGTGC AGCAGACGCT CTCGCAGCTC
ATCACCTCGG TGCTGACGGT CGTCGGCGTG CTCGCGATGA TGTTCTGGAT CTCGCCGCTT
CTCGCGGTCG TCGCCCTGGT GACGGTCCCG CTGTCGGTCG TGGTCGCGGC CGCGATCGCC
AAGCGCTCGC AACCGCAGTT CGTCGAGCAG TGGGCGTGGA CCGGCAAGCT CAACGCCCAC
ATCGAGGAGA TGTTCACGGG CCACGCGCTG GTCACCGTCT TCGGCCGGCA GCAGGAGGCC
GCCGCGACGT TCGCCGAGCG CAACGGCAAG CTCTACGAGT CCGCGTTCCG GGCGCAGTTC
ATCTCCGGAA TCATCCAGCC GGCGCTGGGG TTCATCGCCA ACCTCAACTA CCTCGTCGTC
GCCGTGGTCG GTGGCCTGCG GGTCGCGTCG GGCACGATGT CGCTCGGCGA CGTGCAGGCG
TTCATCCAGT ACTCGCGGCA GTTCACGCAG CCGATCACGC AGATCGCGTC GATGGCGAAC
CTGCTGCAGT CCGGTGTCGC GTCCGCCGAG CGCGTGTTCG AGCTGCTGGA CGCGCAGGAG
CAGACGCCCG ACCCCGCGCA GCCCGCGACG CTGCCGGAAC GCGTGCGCGG CCGCGTCGCG
TTCGAGGACG TGTCGTTCCG CTACGACGCG GACACGCCGC TCATCGAGAA CCTGTCGGTC
GTCGCGGAGC CCGGGCAGAC CGTCGCGATC GTCGGGCCCA CGGGCGCCGG CAAGACCACT
CTCGTCAACC TCGTCATGCG GTTCTACGAG GTCGACTCCG GGCGCATCAC GCTCGACGGT
GTCGACACGC GGGACGTCAC GCGCGACGCG CTGCGGTCGC AGATCGGCAT GGTCCTGCAG
GACACGTGGC TGTACGAAGG GACGATCGCG GAGAACATCG CGTACGGCGT GGACTCCGCG
ACGCACGAGC AGGTCGTCGA GGCCGCCGTC GCGACCCACG TCGACCGGTT CGTGCGCACC
CTGCCCGACG GGTACGACAC CGTGCTCGAC GACGAGGGCG GCGCGGTGTC CGCCGGCGAG
AAGCAGCTGC TCACCATCGC GCGCGCGTTC CTCGCCGACC CGGCGATCCT CATCCTCGAC
GAGGCGACGT CGTCGGTCGA CACGCGCACC GAGGTGCTCG TGCAGCACGC GATGAACGCC
TTGCGCGCCG GGCGCACGTC GTTCGTCATC GCGCACCGGC TGTCCACGAT CCGCGACGCC
GACGTCATCC TCGTCATGGA GCACGGGAGG ATCGTCGAGC AGGGCACGCA CGACGACCTC
GTCGCGGCCG ACGGTGCGTA CGCGCAGCTG TACCGCAGCC AGTTCGCCGA GGCGGCCGCC
CCGGTCGACT GA
|
|---|
| Protein sequence | MSATTRTDRP AGPPPGGPRG GPMGMGLGMP GQKSMDFRGS LRRLLTVLAP ERVRLVAVLV
LGALSVAAAV AGPKLLGNAT DVLFDGVVSR QLAQLLPAGS TQQEAVDALR AAGQGTVADM
VAGMPGLTVG DGVDFERLGS ILLLVLGVYV AAFVFGWLQG RLTARAVQNT VLRMRTQVEE
KLTRVPLSYF DKQPRGELLS RVTNDIDNVA QTVQQTLSQL ITSVLTVVGV LAMMFWISPL
LAVVALVTVP LSVVVAAAIA KRSQPQFVEQ WAWTGKLNAH IEEMFTGHAL VTVFGRQQEA
AATFAERNGK LYESAFRAQF ISGIIQPALG FIANLNYLVV AVVGGLRVAS GTMSLGDVQA
FIQYSRQFTQ PITQIASMAN LLQSGVASAE RVFELLDAQE QTPDPAQPAT LPERVRGRVA
FEDVSFRYDA DTPLIENLSV VAEPGQTVAI VGPTGAGKTT LVNLVMRFYE VDSGRITLDG
VDTRDVTRDA LRSQIGMVLQ DTWLYEGTIA ENIAYGVDSA THEQVVEAAV ATHVDRFVRT
LPDGYDTVLD DEGGAVSAGE KQLLTIARAF LADPAILILD EATSSVDTRT EVLVQHAMNA
LRAGRTSFVI AHRLSTIRDA DVILVMEHGR IVEQGTHDDL VAADGAYAQL YRSQFAEAAA
PVD
|
|---|
| |