Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_1150 |
Symbol | |
ID | 9145029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 1293840 |
End bp | 1295027 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | protein of unknown function DUF58 |
Protein accession | YP_003636253 |
Protein GI | 296129003 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00641052 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000843789 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCCCGTC GTCTGCGCCC CACCGGGCGC GGGATCGCGC TCACCGCCGT GGGCGCCCTC GCGCTGGGGC TGGGCCTCGT CGCGCGCTAC CCCGGCCTCG TGGCGCTGGG AGCGGCGGCC CTCGGGCTCG TCGTCGTCGC GGTGGTGAGC CTGCTGCTGC CGGTGCCGCT GGACGTCACC CACCGCCTCG TGCCCGGGCG CGTCGCGCGC CTCGGCTCGG CCGCCGCGCA CATCGCGCTG CGGAACGCCT CGCCGTGGCT GTCCGTGCGG GTCGCCGGCA CCGACAACGT CGGCGGGCGC GACATCGCGA TGGCACCGAC CCGGCTGGCG CCGCGCGACT CCGGTGTGGT CGAGGTGCCG GTGCCCACGG AGCGCCGTGG CCTGCTGCCG GTCGGGCCGT TCGTGCTCGA GCGCCGGTCC CCGGCGGACC TCGTGCGCTC GCGCGAGCGG CGTGGCGGGT CCTCGACGCT GCAGGTCACG CCCCGGCTCA TCGTCGCGTC CGGACCGCCG ACGGGCCGCC GCCGCGGCCA CTCCGGTGCG CAGGAGCGCG TCGAGCACGG CGGCACCGAC CTCGTGGGGC TGCGCGAGTA CGTGCCGGGG GACGACCTGC GCCGCGTGCA CTGGGCGAGC AGCGCGCGCC ACGGCATCCC GATGGTGCGC GAGGACGCCG ACCCCGCCGA GCCGCACCTC ACCGTGCTGC TCGACGACCG GGCGTCGGCC TACCGGCCGG GGACCGCGGG CGACGGCTTC GAGGAGGCCG TCGACGTCGC CGCGTCCCTG GTGCACGCGT GCGCCTCCGG GGGTGTGCCG GTGCGCTGCG TGACGCTGTC CGGGTCGCTC GACGTCGCCG CACCCGCCGG TGTGCCCGGC AGCGACGAGC CGCTGCGTGC GGCGGCGCAC GCGGTCGACC GGCTCACGCT CGTCGCGACG ACCGACCGTC CGCTGGCGGG CACGGTCACC GTCCCGTCCG GCGGCGGGCC GGGGCCGGAC GTGCTCGCGG TCGTCACGGG GGCGGCCGCA CCCGTGCCGC CGCTGCTGCT CGCGGCGCGG GGTGCGGACA CGGTCGCGCT GCTCGTGGTC GACCCGGCGC CGCTGCGGTC GCTGGGTGCG GCCGACGCCG CGACCGTCGT GCGCGGACCG CGCGCCGAGG ACCTGCTGCG CGGCTGGGAC CTGGCGGTGG CGCCGTGA
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Protein sequence | MSRRLRPTGR GIALTAVGAL ALGLGLVARY PGLVALGAAA LGLVVVAVVS LLLPVPLDVT HRLVPGRVAR LGSAAAHIAL RNASPWLSVR VAGTDNVGGR DIAMAPTRLA PRDSGVVEVP VPTERRGLLP VGPFVLERRS PADLVRSRER RGGSSTLQVT PRLIVASGPP TGRRRGHSGA QERVEHGGTD LVGLREYVPG DDLRRVHWAS SARHGIPMVR EDADPAEPHL TVLLDDRASA YRPGTAGDGF EEAVDVAASL VHACASGGVP VRCVTLSGSL DVAAPAGVPG SDEPLRAAAH AVDRLTLVAT TDRPLAGTVT VPSGGGPGPD VLAVVTGAAA PVPPLLLAAR GADTVALLVV DPAPLRSLGA ADAATVVRGP RAEDLLRGWD LAVAP
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