| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0517 |
|---|
| Symbol | |
|---|
| ID | 9144384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 551188 |
|---|
| End bp | 552456 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1212 |
|---|
| Protein accession | YP_003635630 |
|---|
| Protein GI | 296128380 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0133361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000293243 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCGACCG AACCCGACGA CGACGAGCTC GAGCTGATCC GCCGCTCGGG GGCGGTGCTG
CGCGTGGGGC GGCTCAGCCT CGCGTCCGGA ACCGGCTCGT ACCGCGTGAA GGCGTCGATG
GCGCGGGTCG CCGCGGCGCT GGGGATCGAC CGGCACCAGG CGCACGTGAC CCTCACGGAG
ATCACGACGA CGTCGCACCG CGGCCGGTCG TTCCGCACGG AGGTCACCGA GGTCCGGGCC
GTGGGCGTCA ACACGGACCG GCTCGCGGAG CTCGAGCTGC TCGCGCAGCG CGTCGAGGCC
CGCGCGCCCG TCACGGTGGA GGACGTCACC GCCGAGATCG ACCGGATCAC GGCCAAGCCA
CCGCTGTACC CCGTGGTGCT GAACGCCCTG TGGGCAGCGG TCGCGTGCGC GGCGTTCGCG
TTCCTCAACA ACGGCGGCAC CATCGAGGTC GTCGGGGCGT TCGTCGGGGC CGGGCTCGGG
CAGGGGCTGC GGCGCGTCAT GCTGCACCGC GGGTTCAACC AGTTCGGCGT GACGATGCTC
GCCGCGACGC TCGCGAGCCT GTCGTACCTC GGGTTCGTGC AGGCGCTGCA CGTCCTGGGC
CTGACGGCCG GCGTGCACGA GGCCGGGTAC GTGGCAGCAG CCCTGTTCCT GGTGCCCGGT
TTCCCGCTCG CGACGGGCGC GCTGGACCTG GCCAAGCTCG ACTTCTCGGC AGGGGTCGCG
CGGCTGACGT GGGCGTTGAT GATCTTCGTC TCCGCGGCGT TCGCGGTGTG GGCGGTCTCG
ATCCTGGTGG GCCTGAGTCC GGACCCGCCG CGCGAGCTCG CGCTCGACCC GGCGGCGATG
ACGTCGCTGC GGCTCGTCGC GTCGTTCGTC GGGGTCCTGG GGTTCGCGCT GATGTTCAAC
AGCCCGTGGC GCATGGCGCT GGTCGCCGCC GGCGTCGCGA CGCTCCCGAA CGTGCTGCGC
ATCGAGGCGG TCGCGACCTT CGCCTGGCCG CCGCAGGCCG CCGCCGCGGT CGCGGCGTTC
CTCGTGGGCC TGCTGGCGGC GTGGATCGCG CCGCGCCTCA ACATCCCGCG CATCACGGTG
TACGTGCCGG CGGTGACGAT CATGGTCCCG GGCGTGCCCG CGTACCGGGC CGTGTACCAC
CTGAGCAACG GTGACGTGAC GGCGGCGCTG ACGTACGGGG TGTCGGCCGC GCTCGTCGTG
ACGGCGCTGG CGGTGGGGCT CGCGGTGGCC CGCATGTGCA CCGACCGGGA GTGGGGCTTC
GAGCGCTGA
|
|---|
| Protein sequence | MPTEPDDDEL ELIRRSGAVL RVGRLSLASG TGSYRVKASM ARVAAALGID RHQAHVTLTE
ITTTSHRGRS FRTEVTEVRA VGVNTDRLAE LELLAQRVEA RAPVTVEDVT AEIDRITAKP
PLYPVVLNAL WAAVACAAFA FLNNGGTIEV VGAFVGAGLG QGLRRVMLHR GFNQFGVTML
AATLASLSYL GFVQALHVLG LTAGVHEAGY VAAALFLVPG FPLATGALDL AKLDFSAGVA
RLTWALMIFV SAAFAVWAVS ILVGLSPDPP RELALDPAAM TSLRLVASFV GVLGFALMFN
SPWRMALVAA GVATLPNVLR IEAVATFAWP PQAAAAVAAF LVGLLAAWIA PRLNIPRITV
YVPAVTIMVP GVPAYRAVYH LSNGDVTAAL TYGVSAALVV TALAVGLAVA RMCTDREWGF
ER
|
|---|
| |