Gene Cfla_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCfla_0139 
Symbol 
ID9144004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCellulomonas flavigena DSM 20109 
KingdomBacteria 
Replicon accessionNC_014151 
Strand
Start bp168919 
End bp171483 
Gene Length2565 bp 
Protein Length854 aa 
Translation table11 
GC content72% 
IMG OID 
Productglycoside hydrolase family 9 
Protein accessionYP_003635257 
Protein GI296128007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.877258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCAG GCCTCGCCGC AGCCCTGTGC GCAGGAGCCG TCGCGCAGCC CGCCGTCGCG 
GCGGCCCCGA CCCTGACCGA CGAGCCGTAC GGCAACCTCG CGCAGGCCCT GCAGACCTCG
CTGTACTTCT ACGACGCCGA GATGTCGGGC CCGTCCCGCT CGCAGGGCGT GCAGCGTCTG
CCGTGGCGCG GCGACTCCGA GCTCGCCGAC GCGCGCATCC CGCTGACCAG CGGCGGCACG
GGCACCGACG ACCTCGCCGA CGAGGGCACC AACCTCACGC CGGCGATGAT CGAGGCGTAC
CGCGACATCC TCGACCCCGA CGGCGATGGC ACGGTCGACC TGTCCGGGGG GTACCACGAC
GCCGGCGACC ACGTGAAGTT CGGGCTGCCG CAGACGTACG CGGCGGCGAC GCTCGCGTGG
GGGCTGTACG AGTTCCCCGA CGCGTACGAG AAGGCCGGCG CGGCCGAGGC GATCGAGACG
CACCTGCGCT GGTTCGCCGA CTACTTCCTG CGGTCGACGT TCCGCGACGC GGACGGCGAC
GTGGTGGCGT TCAGCTACAT GGTCGGTCGC GGCGGGGTCG ACCACACGTA CTGGGGGCCG
CCGGAGCTGC AGGACCCCGC GAAGTTCCCG CGGTCGGCGA CCTTCGCGTA CGAGGGCGCA
CCCGCGTCGG ACCAGGCCGC CGGGGCGGCG GCCGCGCTGA CGGCCGTGTC CCTGGTCACG
GCCGAGGACG ACCCGCAGTA CGCCGCCGAG TGCCTCGACG CTGCGCAGGC GCTGTACGAC
TTCGCGCGGG CCCACCGCGG AACCGGCAAC GGTGACGGGT TCTACCCGTC GAGCTTCGAC
GACGACGAGC TGGCGTGGGC GGCGGTCTGG CTGTACGACG CGACCGGTGA CGAGACCTAC
CTCGACCACA TCGTCGCCAA GGACTCCGCG GGGCGGTACA CCGGCTACCT GCGCAAGATC
ATCAACAGCG CGGAGGACAC CTGGCAGAAC ATCTGGGTGC ACTCGTGGGA CACGGTCTGG
GGCGGCGTGT TCGCGCGTCT CGCGCCGCTG TCGAAGGGCG TCGTGCCGGA CTCCGAGAAC
CAGAAGTACT GGTACTACTT CCGCTGGAAC GCCGAGTACT GGACGGGTGG CGCGGTGAAG
CACCGCGAGG CCGGCGACGG CACGTACGTG GCGACGTCGC CGTCGGGCTG GTCGGTCATC
TCGACATGGG GCTCGGCCCG GTACAACACG GCCGCGCAGC TCCAGGCGCT GACCTACCGC
AAGTACTCGC ACCTCGACTG GGGCGACCCC GAGGTCAACG AGCGCGAGGG CGTCGCGCTG
TCGCAGTGGG CGCTGTCGCA GATGAACTAC CTCATGGGCG ACAACCCGCT GCACCGCTCG
TACGTCGTCG GGTTCACGGC GAACGACGAC GACCACCACG CGCGCTTCCC GCACCATCGT
GCCGCGCACG GCTCGGACAC CAACAGCATG CTCGTGCCCG CCGAGCACCG GCACGTGCTG
TGGGGTGCGC TGGTCGGCGG CCCGGACCTG GCCGACGAGC ACAAGGACGA GACGACCGAC
TACGTGTACA ACGAGGTCGC GATCGACTAC AACGCCGGGT TCGTGGGCGC GCTCGCGGGG
CTCGTCGAGT ACTTCGGTGA CGGGCAGCCC GTCGAGACGT GGGAGCCGGC ACCCGAGGCC
GAGGTCGACG CGTACGTCGT GCGCGCCGAG CTGGAGCAGG AGAACACGTC GCGCACGCAG
GTGACGCTGG AGATCTCGAA CCGCTCGGTG CACCCGCCGG CCGAGGTCGA CGACCTGTCG
CTGCGCTACT TCTTCGACAT CAGCGAGCTC CAGGCCGACG CTCAGACCAT CGACGACGTG
CGGGTCGACG TCTACTACGA CGAGGCGAAG ACGCTCTCGG GCAAGGCCGT GAGCATCGGT
GAGCCCGTGC ACGTCGGCGA CGGCCTGTAC TACGTCGAGG TCTCGTGGGA CGGCATCCCG
TTCTACGGCA CGCGCGAGGT CCAGATCGGG CTCATCGCGG GCCAGAACGC GCAGTGGACG
ACCACCTGGG ACCCGACGAA CGACCCGAGC CGTCAGGGGA TCGGCGACGA CCTCGCCCTG
ACGACGGCGG TGCCCGTGTA CCGGGACGGC GTGCTGGTGT TCGGCGAGGA GCCGGACGGG
ACCACGGGCC CGACGCCCAC GCCCACGCCC ACCGTGACCC CGACGCCCAC CGCGACGCCG
ACGACCACAC CGACCGCGAC CCCCACCCCG ACGCCCACGT CGACCACCGC GGCGGGCTGC
ACCGCGCGCC TCGAGGTCCG CAGCACGTGG CCGGGCGGGT ACGAGGCCCA GGTGCACGTC
ACGGCCGACC GTGACCTCAC CCGGTGGACG GCCACGACGA CCCTGCCGGC CGCCGTGACG
GTCATGCAGG CGTGGAACGG CACGGTCGAG GCGACCGGGA CGACGCTGAC GGTCGCCCCC
GCCGCCTGGA ACGGCGCGAT CGCCGCCGGG GACACCGTCT CCGTCGGGCT GATCGGTTCC
GGCACCGCCC CCGAGGCCGG AGCGCTGACC TGCACGGCCC GGTGA
 
Protein sequence
MVAGLAAALC AGAVAQPAVA AAPTLTDEPY GNLAQALQTS LYFYDAEMSG PSRSQGVQRL 
PWRGDSELAD ARIPLTSGGT GTDDLADEGT NLTPAMIEAY RDILDPDGDG TVDLSGGYHD
AGDHVKFGLP QTYAAATLAW GLYEFPDAYE KAGAAEAIET HLRWFADYFL RSTFRDADGD
VVAFSYMVGR GGVDHTYWGP PELQDPAKFP RSATFAYEGA PASDQAAGAA AALTAVSLVT
AEDDPQYAAE CLDAAQALYD FARAHRGTGN GDGFYPSSFD DDELAWAAVW LYDATGDETY
LDHIVAKDSA GRYTGYLRKI INSAEDTWQN IWVHSWDTVW GGVFARLAPL SKGVVPDSEN
QKYWYYFRWN AEYWTGGAVK HREAGDGTYV ATSPSGWSVI STWGSARYNT AAQLQALTYR
KYSHLDWGDP EVNEREGVAL SQWALSQMNY LMGDNPLHRS YVVGFTANDD DHHARFPHHR
AAHGSDTNSM LVPAEHRHVL WGALVGGPDL ADEHKDETTD YVYNEVAIDY NAGFVGALAG
LVEYFGDGQP VETWEPAPEA EVDAYVVRAE LEQENTSRTQ VTLEISNRSV HPPAEVDDLS
LRYFFDISEL QADAQTIDDV RVDVYYDEAK TLSGKAVSIG EPVHVGDGLY YVEVSWDGIP
FYGTREVQIG LIAGQNAQWT TTWDPTNDPS RQGIGDDLAL TTAVPVYRDG VLVFGEEPDG
TTGPTPTPTP TVTPTPTATP TTTPTATPTP TPTSTTAAGC TARLEVRSTW PGGYEAQVHV
TADRDLTRWT ATTTLPAAVT VMQAWNGTVE ATGTTLTVAP AAWNGAIAAG DTVSVGLIGS
GTAPEAGALT CTAR