| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_2356 |
|---|
| Symbol | |
|---|
| ID | 9143357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | - |
|---|
| Start bp | 2662907 |
|---|
| End bp | 2663758 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_003634627 |
|---|
| Protein GI | 296127375 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 4.49241e-17 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA ACTCTTCAAC TATACTTACT GGATTATTTG CTTCTCCATG CCGGCATAGT
ATATCCCCTA TTATGCATAA TGAAGCATTT AATAAACTTA ATCTTAATTA TGCTTATTTA
GCTTTTGAAG TGGATAAAAA TAATTTAAAA GATGCTGTAA ACTCAATAAA AACATTAAAC
ATGAGAGGCG TAAACCTATC AATGCCCAAT AAAAAAGAGG TAATAAAATA TCTTGATGAA
ATATCAGAGG CCGCAGAACT CACTCAAAGC GTTAATACCA TAGTCAATGA TAATGGAATA
CTCAAAGGAT ACTCTACTGA TGGAGAGGGT TTTATAAAAT CATTAGAAGA AGAAAATATA
TTTATAAAAG ATAAAAATAT TACAATACTG GGTACTGGAG GAGCTTCTAT TGCTATAATA
TCACAGGCTG CTTTGTATGG AGTAAAAGGA ATATATGTTT TTAAAAGAGA TACAAACTGG
GGCGAACAAA AAAAAATTAT TGATAATATA GCAGAAAAAA CTAACTGCTC TATAGAATTA
TTCTCACTTG AAAATAAAAA CATTTTAAAA AGAAAAATAG ACGACAGCAG TATATTAATT
AATGCTACAA GCGTTGGTAT GAAAGAAGAT GTTTCTTTAA TAGAAGATAA AACTTTTTTT
AGAGATGATT TAGTAGTAAG CGATTGTATA TATAGTCCCG CAAAAACAAA ACTGCTTCAA
ATATCAGAAA AAGAAGGATG TAAAATCATA AACGGTATGG GAATGTTATT GTATCAGGGT
GCTTTATCAT TTGAGCTTTG GACTAATGAA AAAATGCCTG TAGAATATAT AAAAAATATC
ATATTTAAAT AA
|
|---|
| Protein sequence | MKINSSTILT GLFASPCRHS ISPIMHNEAF NKLNLNYAYL AFEVDKNNLK DAVNSIKTLN
MRGVNLSMPN KKEVIKYLDE ISEAAELTQS VNTIVNDNGI LKGYSTDGEG FIKSLEEENI
FIKDKNITIL GTGGASIAII SQAALYGVKG IYVFKRDTNW GEQKKIIDNI AEKTNCSIEL
FSLENKNILK RKIDDSSILI NATSVGMKED VSLIEDKTFF RDDLVVSDCI YSPAKTKLLQ
ISEKEGCKII NGMGMLLYQG ALSFELWTNE KMPVEYIKNI IFK
|
|---|
| |