| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_2226 |
|---|
| Symbol | |
|---|
| ID | 9143227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | + |
|---|
| Start bp | 2529784 |
|---|
| End bp | 2530854 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | |
|---|
| Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| Protein accession | YP_003634499 |
|---|
| Protein GI | 296127247 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATA TACAAAATAT TAACGATATA AGAAAAAAAG TAAGAACTGT AAAAATAGGA
AATATTTTAA TAGGTTCTGA TAATCCTATA AGTGTTCAGT CTATGACAAA TACAGATACA
AGAGATATAA AATCTACAGT AGAACAAATA AAATCACTTG AAAATGCAGG TGTTGATATA
GTAAGGCTTG CGGTACTAGA TATGGATGCG GCAAAAGCCA TAAAAGAAAT AAAAAAACAT
ACTGAAGTTC CATTAATAGC AGATATACAT TTTGACCATA ATTTGGCATT AGAGAGTATG
AAAAGCGGTA TTGATGCTTT AAGATTGAAT CCGGGTAATA TAAAAAATAA AGAGAAGGTA
AAAGAGGTTA TAAAAGAGGC TAAAGAGAGG AACCTTACTA TACGTGTAGG AGTTAATGGC
GGAAGTTTAG ATAGAAGCGT ATACAAAGAA GTAACAGCTG AAAATATGGT AAAAAGTGCC
GCTGAGCATA TAAAATTAAT GGAAGATTTA GATTTTACTA ATATTAAAGT ATCTTTAAAA
TCTTCTGATA TAAAAACTAC AATAGAAGCA AATATGTTAT TTAGAGAAAA GTTTAATTAT
CCTATACATC TTGGAGTAAC TGAAGCTGGT ACATTGAGAA GTTCTCTTAT AAAAAGTACA
AGTGCCTTAT CATTTTTAAT AATGCAGGGA ATAGGAGATA CTATAAGATA TTCTATAACT
GGGGATCCAG TAGAAGAAGT AATGGCTGGA AAGATGCTTC TTAAATTTTT AGGACTTAGA
AAAGAGCCTT CTATAGAAAT AATTTCATGT CCTACTTGCG GCAGATGTCA GGTTAATGTT
GAGGAGGCTG CAAGTTTCAT AGAAAAGCAT GTCCAGAATA TAAAGAAGAA TATTACCATA
GCTATTATGG GCTGCGTTGT TAATGGTCCG GGTGAGGCTA GGAATGCTGA TTTTGGTGTT
GCTGGAACTG GTGATGGTAA TTTTATTTTC TTTGAAAAAA ATAATGAGCC TATAAAAGTT
TTGGGTGATA ATATTATAGA TTTTCTTACA AAAAAAATAG AAGAGTTTTA A
|
|---|
| Protein sequence | MMDIQNINDI RKKVRTVKIG NILIGSDNPI SVQSMTNTDT RDIKSTVEQI KSLENAGVDI
VRLAVLDMDA AKAIKEIKKH TEVPLIADIH FDHNLALESM KSGIDALRLN PGNIKNKEKV
KEVIKEAKER NLTIRVGVNG GSLDRSVYKE VTAENMVKSA AEHIKLMEDL DFTNIKVSLK
SSDIKTTIEA NMLFREKFNY PIHLGVTEAG TLRSSLIKST SALSFLIMQG IGDTIRYSIT
GDPVEEVMAG KMLLKFLGLR KEPSIEIISC PTCGRCQVNV EEAASFIEKH VQNIKKNITI
AIMGCVVNGP GEARNADFGV AGTGDGNFIF FEKNNEPIKV LGDNIIDFLT KKIEEF
|
|---|
| |