| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_0943 |
|---|
| Symbol | |
|---|
| ID | 9141924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | + |
|---|
| Start bp | 1109127 |
|---|
| End bp | 1111391 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 22% |
|---|
| IMG OID | |
|---|
| Product | lipoprotein |
|---|
| Protein accession | YP_003633238 |
|---|
| Protein GI | 296125986 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00000209151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA AACCTCAAAC AAAAGAAGAA TTAAAAAAAT TAGTGGAAGA TAAAAGTATT
AATCTTGGAA GCATTGATAC AAGTTTAATA ACAGATATGA GCGAATTATT TAGAAGTAGT
GAAAGAGAAG ATTTTTCAGG TATAGAAACT TGGGACGTAT CTAATGTTGA AGATATGAGC
AGTATGTTTA AAGGATGCAA AGAATTTAAT CAGCCTCTAA ATAACTGGAA TACCAATAAA
GTTAAAGATA TGTCGAGAAT GTTTGAGAGC TGTTCTAACT TTAATCAGCC TTTGGATAAA
TGGGACACTT CTAATGTTAG CAGTATGAAC AACATGTTTC AAGAATGCAA ATCTTTTAAT
CAAGACATTA GTAATTGGAA TGTTTCAAAA GTAACAAATA TGAATTCTAT GTTTAATGGG
TGTACAAGCT TTAATCAAAA TATAAGTAAT TGGAATATAA AGAGCGTAAA ATATATGATT
TCTATGTTTG CTAATGCTTC ATCTTTTAAT CAGGATTTAA ATAATTGGGA TATAAGCAAG
GTAAAAAGTA TTAGTTTTAT ATTTAATCGT GCTAATAGTT TTAAAATAAT TCCTTATAAA
TGGAATTTTG ATCATATAAA AGAAGATATT GATTATATAT TACCAGAAGA AATGCTTGAT
GAAATATATT CTAAAAAAGA ACCTATTAAT TTGTTATGCT ATTTATTTTA TGATAAATAT
TATGAAGATA AAAATTTACA AAAAGTAGAT GTTAAATTGT GGCATAAGAC TTTAAAAAAT
TCAATTAATA AAAAAATTAT TTCTTTTGTT TCAAAATTAG AAAAAGATTT TGAAAATGAA
CTTAAAAATG AAATAGAAGA TCATTCTAAT AAAATAATTT TTCAAAATAT TGAAGAAGCA
GAAGAATATG TTAATAATAA TTATGATAAG TCATTTGATA AAAGTATAAA ATTTATAGAT
GATAAATATA CTATCTTTAC TAAAGACAGA AAAACAAAAA TAAGTTTAAA TATGATTAGA
TTTATTTACG GAAGTTATTT AAAAGTGAAA GATAATGTTG TAAGATTAGA AATTATTGAT
GATATTATTA ATTTGCTTGA TATAGAAAGT TTTAGAAATG CATCTTATGA AATATTTTTA
AGCGACAGAA GTAAATTAGC TTCAAGAATT ATTTGCGGGT TATATGGAGA TGGTAAAATA
GTAGAAGATT ATGTAAAAAG TTTAAAAAAA GAGTTTTATC CTCGTTCATA CTATGTTTAT
ATTTTAGCTT TAAATAAAAA TAAATATGCA TTAAGATTAC TTTGCGAGAC ATCTTTAAAA
TCAAAAATAG AAAGCATAAA AAATGCAGCC GAATTAGCAC TTGAAACTAT AGCTAATAGA
ATGAAAGTTG AAAGATATGA ATTAGATGAT TTATTAGTTC CTGATTTTAA TCTTGATAAG
AATGGCGAGA GGATAGTATA TGCTGAAGAT AAAGAATATA AACTTTTTAT TGATGATAAT
ATGGAGCTTC ATATTATGCA TAATAATAAA GAATTAAAAA CAGCACCTAA AACTTTTTCT
AAAGAGTTAA AATCAGAAAT AACTTTTATT AAAAAAGAGA TAAAAAACAT TGTAAAAAGT
CAAAGAGATA AAATGATATA TCTTTTAATG AATGGAAGAA AATATTCTTA TAATTTTTGG
AAATCTGTTT ATATAGATAA TTATTTTTTT AATGTGTATG CTGTTAAATT AATTTGGAAC
TTATATGATG AAAATAATTT GTTTTTAACA ACATTCAGAT ATTTAACTGA TGGAAGTTTT
ACTGATTATA ATGATAATGA AGTAAAAATC AATGAAAATA ATTCTATTAG TTTAGCATAT
GTAAAAGAAA TGGATAATGA TATTATAGAG AAATGGAAAA AGCAATTATC AGATTATGAG
ATTGTTCAGC CTATTAATCA ATTAAGAGTT ATTGATGATT TAGAAAAAGA ATTTTATTCA
TTTAATGATG AGTATAAATT ATCTAATTTA AAAAATTTTG TTAATAAATA TCCTTTTAAT
GAATATTATG AAGATTATTA CACAATAGAT GGATATAAAT TTGAAGAGAA AGTAAGCAGT
TTAGTATTAG ATATATCAAC AAATGGTATT AGCAGAGATA ATGCTAATTT TGGAGATATG
ATAGAAATAG TATTAAAAAT ATTAAATATA TCAGAAAATA ATAAAGATTT AGTTGATAGA
TTTATGTTTG GTTGTATTTT AATGCTTGAA AATTTGGTAC AATAA
|
|---|
| Protein sequence | MKYKPQTKEE LKKLVEDKSI NLGSIDTSLI TDMSELFRSS EREDFSGIET WDVSNVEDMS
SMFKGCKEFN QPLNNWNTNK VKDMSRMFES CSNFNQPLDK WDTSNVSSMN NMFQECKSFN
QDISNWNVSK VTNMNSMFNG CTSFNQNISN WNIKSVKYMI SMFANASSFN QDLNNWDISK
VKSISFIFNR ANSFKIIPYK WNFDHIKEDI DYILPEEMLD EIYSKKEPIN LLCYLFYDKY
YEDKNLQKVD VKLWHKTLKN SINKKIISFV SKLEKDFENE LKNEIEDHSN KIIFQNIEEA
EEYVNNNYDK SFDKSIKFID DKYTIFTKDR KTKISLNMIR FIYGSYLKVK DNVVRLEIID
DIINLLDIES FRNASYEIFL SDRSKLASRI ICGLYGDGKI VEDYVKSLKK EFYPRSYYVY
ILALNKNKYA LRLLCETSLK SKIESIKNAA ELALETIANR MKVERYELDD LLVPDFNLDK
NGERIVYAED KEYKLFIDDN MELHIMHNNK ELKTAPKTFS KELKSEITFI KKEIKNIVKS
QRDKMIYLLM NGRKYSYNFW KSVYIDNYFF NVYAVKLIWN LYDENNLFLT TFRYLTDGSF
TDYNDNEVKI NENNSISLAY VKEMDNDIIE KWKKQLSDYE IVQPINQLRV IDDLEKEFYS
FNDEYKLSNL KNFVNKYPFN EYYEDYYTID GYKFEEKVSS LVLDISTNGI SRDNANFGDM
IEIVLKILNI SENNKDLVDR FMFGCILMLE NLVQ
|
|---|
| |