Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmur_0023 |
Symbol | |
ID | 9140991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachyspira murdochii DSM 12563 |
Kingdom | Bacteria |
Replicon accession | NC_014150 |
Strand | + |
Start bp | 25083 |
End bp | 27134 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | putative YD repeat protein |
Protein accession | YP_003632333 |
Protein GI | 296125081 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG CTAAGATTAT TTTTATACTG CAGTTTATAC TAATACTTAC TTCTGCTAAT GTTTTTGCAG TTGTTACTAG GACATTGTCT AGTACAAAAA GAGGTTTTTT TGACAATGGA GTATATGACG GAGTTATGCT TACAGAACAG GGCAGTTTAA CATTAGCCCC TGTTATAGAA CAAGACGGAG CTATTTCCGG AAAGGATATT TGGAAAATTT ATCCTGTAAG TGACGGCGGT ATGTTTGCTG CTATAAGCGG AAGCGGTGCT GAACTATATA AAAGAGATGC AGAATCTACA AATTTTACTT CTTTTGCTTC AGAAAGTAAT GAAAGTGCTT TTACTGCTGT TATAAGCGAC AGTCAGGGCA ATGTATACGC TGCTGTAGGA CCTTATGCTA AAATAATAAA GTATGATAGC AGCGGCAAGG AACTTTGGAG AAAAACTTTA GATGATACTT ATATATGGGA TATGAAGTTT GACAATAACG GAAACCTTTT TGCTGCAGCA GGCGGAAATA ATGCAAGAGT AATAAAAATA TCATCAGATG GTGAAATTAA AGAGATATTA AAAACTGAAG AACAGCATGC CATGTCATTA TATTTTGACA GCAAAAATAA TAAAATGTAT GTGGGTACTG CTGGAAGAGG TTTGGTATTA TGTATAGATT TATCTACAAA TTTAGAAAAT CCTTCATACA GTGTAGTCTA TGATACTGCC GAAAATGAAG TTTATGCTAT TACTATGGAT AATATAGGTA ATTTATACTT TGGTACAGCT ACAAGACAGC CTGCTTATTT AATACTGCCT TCAATTATAG ACGGAGATAA AAGACCTGAT GAAGCTGATA AAGAGTTTAG AAACTCTCTT TATAGAGCTG ATACTAATGG AACTGTTCAA AGATTATTTT TCTTAAATCA GACATTAGTT TTAGCATTGA GCAGCGATAA AAACAATAAT ATATATTTTG TTACTGGAGA TACTGCTGAT ATATATAAAA TTAACGGAGA TGACGGACTT TTATCATATA TAGGCGGATT AAAAAATAAA ATACTTTCTA CATTTGCAGT TTCTGAAGAC GGGCTTTATT TTGCTATATC AAAAACTGGT GAGATATACA GAATAAAACA TGGATATCCT AATTACGGAA GTTTTACAAG CGACACATTA GATTTAAAAC TTTTAAGTAA ATTAGGAAGT TTTAATGCTA TGAGTACAGT TCCTCAAGGC GGCAATATAT CTGTTGAAGT TAGAACTGGT AATGCTGCAA GAGTTGATAA AAGCTGGAGT GATTTTATGC CTATTGATGC CAATGGTAAA GTAAATGTTC CAGAAGGCAG ATTTATGCAG TTTAAGGTTA CAATGGAGAC TTCTGATACT GAAATAACTC CAGTATTAAA TTCTATGGAT TTTACATATG TTGAAAACAA TTTAGCTCCT GAAGTATTAA ATGGAGGACT TACTACAAGA TACCGTCAGC AGAATGATTC TTCTGAAACA GCTAAAAGCC CTCAATTAGA AGAAAACGAA GCTATGGTAT ATTGGAAAGG CTCTGATCCT AACGGTGATA AATTATCATA TGATTTGGAA TACAGATTAA AAGGTGAAAA AAATTATAGA AAATTAGCTT CCAATTTGGA GACATCATAC TATAAATTTA ATTCCTATTT AATGCCTTCT GGTATATACG ACTTTAGAAT AACAGCAAGC GATAAATATG ATAATCCCGT AGGTGAGATA AAAACAAAAA CTTTAGAAGT ATTTAATGTT AAATATGATA ATGATCCTCC TGAACTTTTT GATTTTAATG TTACTGGAGA AGGATCAGGA AGGGTAGTCA CATTCAGAGT AGAGGATAAA TTATCATTCA TTAAAACTGT GAGATATTCT ACTATAACAG GAGAATGGAG ATATATAGTT CCAAATGACG GATTATTGGA TTCTATGAAT GAAGCATTTA CTATTAATAT AGATGATGCT GAAGCTGGTT CCGTTACTAT AGAGGTTATG GATACTGAAG GAAATACTAA ATATTATTCA TTTATTATAT GA
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Protein sequence | MKIAKIIFIL QFILILTSAN VFAVVTRTLS STKRGFFDNG VYDGVMLTEQ GSLTLAPVIE QDGAISGKDI WKIYPVSDGG MFAAISGSGA ELYKRDAEST NFTSFASESN ESAFTAVISD SQGNVYAAVG PYAKIIKYDS SGKELWRKTL DDTYIWDMKF DNNGNLFAAA GGNNARVIKI SSDGEIKEIL KTEEQHAMSL YFDSKNNKMY VGTAGRGLVL CIDLSTNLEN PSYSVVYDTA ENEVYAITMD NIGNLYFGTA TRQPAYLILP SIIDGDKRPD EADKEFRNSL YRADTNGTVQ RLFFLNQTLV LALSSDKNNN IYFVTGDTAD IYKINGDDGL LSYIGGLKNK ILSTFAVSED GLYFAISKTG EIYRIKHGYP NYGSFTSDTL DLKLLSKLGS FNAMSTVPQG GNISVEVRTG NAARVDKSWS DFMPIDANGK VNVPEGRFMQ FKVTMETSDT EITPVLNSMD FTYVENNLAP EVLNGGLTTR YRQQNDSSET AKSPQLEENE AMVYWKGSDP NGDKLSYDLE YRLKGEKNYR KLASNLETSY YKFNSYLMPS GIYDFRITAS DKYDNPVGEI KTKTLEVFNV KYDNDPPELF DFNVTGEGSG RVVTFRVEDK LSFIKTVRYS TITGEWRYIV PNDGLLDSMN EAFTINIDDA EAGSVTIEVM DTEGNTKYYS FII
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