Gene Plim_4209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4209 
Symbol 
ID9140930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5382418 
End bp5382900 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content53% 
IMG OID 
ProductPeroxiredoxin 
Protein accessionYP_003632216 
Protein GI296124438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00311011 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTG TTCCTGAAGT CGGGAGTAAA GCCCCTGCCT TTGATCTCCC TGCATTTCCC 
AAAGGCCGAT ACAAGCTCAG CGGCCTCAAA GGGAAGTATG TCGTGCTCTA CTTCTACCCT
CGCGACAACA CGCCCGGCTG CACCACCGAA GCCTGTGATT TCCGTGATCG GCATGAGGCT
ATAGCAGCAG CGAATACGGT GGTTCTAGGT GTCAGTACCG ATAGTGTTGA TTCCCATCAG
AAGTTTATTG AGAAGTTTGA ACTTCCCTTT CCGCTTCTGG CCGACGAAGA CCATGCCCTT
GCCGAGAAGT ACGGCGTGTG GGTCGAAAAA AACATGTATG GCAAGAAGAG TATGGGAATA
CAGCGGGCTA CATTTCTGAT CGATCCAGCC GGAAAAATTG CGGCTGTCTG GCCTAAGGTC
AAAGTGGATG GCCATGCCGA GGCTGTGATG GCGAAGATAC AGGAACTCCA GGCCGCCGGC
TGA
 
Protein sequence
MSAVPEVGSK APAFDLPAFP KGRYKLSGLK GKYVVLYFYP RDNTPGCTTE ACDFRDRHEA 
IAAANTVVLG VSTDSVDSHQ KFIEKFELPF PLLADEDHAL AEKYGVWVEK NMYGKKSMGI
QRATFLIDPA GKIAAVWPKV KVDGHAEAVM AKIQELQAAG