Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_4209 |
Symbol | |
ID | 9140930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 5382418 |
End bp | 5382900 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Peroxiredoxin |
Protein accession | YP_003632216 |
Protein GI | 296124438 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00311011 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTG TTCCTGAAGT CGGGAGTAAA GCCCCTGCCT TTGATCTCCC TGCATTTCCC AAAGGCCGAT ACAAGCTCAG CGGCCTCAAA GGGAAGTATG TCGTGCTCTA CTTCTACCCT CGCGACAACA CGCCCGGCTG CACCACCGAA GCCTGTGATT TCCGTGATCG GCATGAGGCT ATAGCAGCAG CGAATACGGT GGTTCTAGGT GTCAGTACCG ATAGTGTTGA TTCCCATCAG AAGTTTATTG AGAAGTTTGA ACTTCCCTTT CCGCTTCTGG CCGACGAAGA CCATGCCCTT GCCGAGAAGT ACGGCGTGTG GGTCGAAAAA AACATGTATG GCAAGAAGAG TATGGGAATA CAGCGGGCTA CATTTCTGAT CGATCCAGCC GGAAAAATTG CGGCTGTCTG GCCTAAGGTC AAAGTGGATG GCCATGCCGA GGCTGTGATG GCGAAGATAC AGGAACTCCA GGCCGCCGGC TGA
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Protein sequence | MSAVPEVGSK APAFDLPAFP KGRYKLSGLK GKYVVLYFYP RDNTPGCTTE ACDFRDRHEA IAAANTVVLG VSTDSVDSHQ KFIEKFELPF PLLADEDHAL AEKYGVWVEK NMYGKKSMGI QRATFLIDPA GKIAAVWPKV KVDGHAEAVM AKIQELQAAG
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