| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4189 |
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| Symbol | |
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| ID | 9140910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5353651 |
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| End bp | 5355324 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003632196 |
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| Protein GI | 296124418 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCG GGGCGACACT GGTCCGTAAA GGAGTCATTA CTCCTGATCA GCTCAAAGAA
CTGGGTGTCC CCAGCGGTGC GCGCGTTGAT CGACTGGTGA TCGACAAAGG CTGGGCCGAC
GAAGGTCAAG TTCTGCAGAC CATTGCCCAG GAACTGGGGA TGCGCTTCGT CGATATCAAG
CACGAAGCAA TTGATCGCGA TCTGCTGATG CAGTTCCCCA CGAACGCTGT CTTCCGGCAC
TCTCTGCTGC CCATTGGTCG AAACAACGGC AGTGTCATTG TCGCCACATC AGACCCGTTC
AACCTCGAAG CGCTCGAAGA GCTTTCCAGC GTCAGTGGCT TTCATCTCGA GCCAGTTCTG
GCGCGCAAGC TCGACGTGAT TGAGATGATT AAGGATCATC TCGGTGTCGG GGGCGATACA
CTCAACCAAC TGGTGGCCCA AAGGGCTGCT GATGGTGTCG AACTTCTCAG TGAACCACTC
GAACAGACTG GTGATCTCGA AGATGCCGCT GAAGCGGCCT CGGTCATCAA GCTGGTCAAC
GAGTTGCTGG TCGAAGCTCT CGAAATGCAG GCCAGTGATG TGCATATCGA GCCACAGGAA
AATGGCCTGA TCATCCGCTT CCGCGTCGAT GGTTTGCTGC GTGTTCAGCC ATTGCCTCCT
TCGATCAATC AGTTCCAGCA GGCCATTGTC ACCCGGCTCA AGATCATGTC CCGGCTGAAT
ATTGCTGAGA AACGATTGCC ACAGGACGGC CGCATCAAGC TCAAGATTAA GGGCCGCGAG
ATCGACGTAC GCGTATCGAT TATCCCGATG CTGTATGGCG AAGGGGTCGT GATGCGTCTG
TTGGATAAAG GCCGTATGGT CTTTAATCTG AAAAACGTGG GCATGCCGCC CATGGTCGAT
GTCCCCTTCC GCCAGTTGAT CACACTCCCC CACGGAATTG TGCTGGTCAC TGGCCCGACT
GGTAGTGGTA AAACGTCGAC GCTGTACAGT GCCCTCCACG AGATCAAAGA CCCGTCGGTC
AAAATCATCA CGGTCGAAGA TCCTGTTGAA TACCAGATGC CGGGCATCAG CCAGATTCAG
GTCCATTCGA AAATCGGCCT GACGTTTGCC GCCGGTTTGC GCAGTATTCT ACGTCATGAC
CCGGATGTGA TTCTCATCGG GGAAATTCGC GATAGCGAGA CGGCTGAAGC CGCCATTCAG
GCTTCGCTCA CGGGTCACCT GGTCTTCAGT ACGTTGCACA CCAACGATGC CCCGTCGGCT
TTTGCACGAC TGGTCGATAT GGGTGTGGAA CCTTATCTCG TTTCGAGTAC GGTGGCGGGT
GTGCTGGCTC AGCGACTGGT CCGCCGACTT TGCAAACATT GCAAGGTGCC TGTCCAGGTG
AAGCCCGGAA TGCTTCCGGA CGATTTTCCC GATCCGGATT GTGAATTCAT CTACGAACCG
GGAAGTTGCC GGGAATGTCG CAATACGGGG TACACGGGTC GTCAGGCAAT CTTTGAACTG
CTGCTGACCG ATGCTGAAAT TGGCCGGCTA TGTATTCGCC GGGCCGCTGC GACAGAAATC
CGCTCTTACG CGCTCACTGC CGGTATGGTC ACATTACGAG AATCAGGACT TTTGCGCGTC
GCCGACGGCA CAACCACTCT CGAAGAAGTT GATCGTCTCG CCAAACGAGA ATAA
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| Protein sequence | MNIGATLVRK GVITPDQLKE LGVPSGARVD RLVIDKGWAD EGQVLQTIAQ ELGMRFVDIK
HEAIDRDLLM QFPTNAVFRH SLLPIGRNNG SVIVATSDPF NLEALEELSS VSGFHLEPVL
ARKLDVIEMI KDHLGVGGDT LNQLVAQRAA DGVELLSEPL EQTGDLEDAA EAASVIKLVN
ELLVEALEMQ ASDVHIEPQE NGLIIRFRVD GLLRVQPLPP SINQFQQAIV TRLKIMSRLN
IAEKRLPQDG RIKLKIKGRE IDVRVSIIPM LYGEGVVMRL LDKGRMVFNL KNVGMPPMVD
VPFRQLITLP HGIVLVTGPT GSGKTSTLYS ALHEIKDPSV KIITVEDPVE YQMPGISQIQ
VHSKIGLTFA AGLRSILRHD PDVILIGEIR DSETAEAAIQ ASLTGHLVFS TLHTNDAPSA
FARLVDMGVE PYLVSSTVAG VLAQRLVRRL CKHCKVPVQV KPGMLPDDFP DPDCEFIYEP
GSCRECRNTG YTGRQAIFEL LLTDAEIGRL CIRRAAATEI RSYALTAGMV TLRESGLLRV
ADGTTTLEEV DRLAKRE
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