Gene Plim_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4135 
Symbol 
ID9140855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5303982 
End bp5304512 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content56% 
IMG OID 
Productribonuclease H 
Protein accessionYP_003632145 
Protein GI296124367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.204286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCTC ATCAGGCCGG GTCAACTGCT ACCTCTGCCA GCGTTGTGGA TCAGGAACAG 
TCTGCACTTC CTTTTGTGCA GCTCTTTACA GACGGGGCAT GCAGTGGCAA TCCTGGCCCG
GGTGGTTGGG GTTACATTCT CCGGCATCCC GCCTCTGGCA AAGAGAAAGA GGCCAGTGGT
GGCCTGGCTG AGACCACCAA CAACCAGATG GAACTGCAGG CTGTTATTGA AGGTCTTAAA
GCCCTCAAAA GCCGTTCTCG GGTGGAAGTG GTGACCGATA GCAGCTACGT CGCCAAAGGG
TCCTGCGAGT GGTTGCCCGG TTGGAAGCGT AATGGCTGGC AACGCAAAGA GGGCAAATCC
TTCAAGCCGG TCAAAAACGT TGAATACTGG CAAGCTCTTG ATCAACTACT CGCAAGGCAT
CAGGTGCAGT TTAAGCTGAT CAAGGGGCAT GCCGGTCATG CGGAGAATGA GCGCTGCGAT
GTGCTGGCTG TCGCTGCTGC TGCCGCCGCC AAAGCCTCTG CCAACGGCTG A
 
Protein sequence
MSAHQAGSTA TSASVVDQEQ SALPFVQLFT DGACSGNPGP GGWGYILRHP ASGKEKEASG 
GLAETTNNQM ELQAVIEGLK ALKSRSRVEV VTDSSYVAKG SCEWLPGWKR NGWQRKEGKS
FKPVKNVEYW QALDQLLARH QVQFKLIKGH AGHAENERCD VLAVAAAAAA KASANG