Gene Plim_4120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4120 
Symbol 
ID9140840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5286152 
End bp5286589 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID 
ProductTadE family protein 
Protein accessionYP_003632130 
Protein GI296124352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCCA GATCCATCCA GCACAATCCT TCACGATGGC ATCATCGATC CACTTCCCGC 
CGGGGTGCGC TATCGGTCGA ACTTTCACTG ACGATCCCGG TGCTGTTTGC GATCTTCTTC
GGCGCTGTCG AAGTGACTCG TCTGAATATG CTCAGGCATA CCATTGAAAA TGCCGCCTAC
GAAGGGGCCC GGCAAGGAAT CATTCCCGGC GCCACGGCAG ATTCCGCACG AAATGCGGCT
CTGGCAGCTT TGAATGCCGT CGATGTGCGG GATGCCGTCG TGCGCGTCTC CCCGACTGTC
ATCGTGCCAT CCACGTCCCG GGTCTCGGTC GAAATCGAAG TCCCCGTCGC CAGTAACAGT
TGGGGAACCT CCTCATTTGT GGGTCTCGAC AACTTAACCC GCTCTTGCAC ACTCACCCGC
GAACTTCTGG CTTTTTGA
 
Protein sequence
MQARSIQHNP SRWHHRSTSR RGALSVELSL TIPVLFAIFF GAVEVTRLNM LRHTIENAAY 
EGARQGIIPG ATADSARNAA LAALNAVDVR DAVVRVSPTV IVPSTSRVSV EIEVPVASNS
WGTSSFVGLD NLTRSCTLTR ELLAF